PuSH - Publikationsserver des Helmholtz Zentrums München

Dershwitz, P.* ; Gu, W.* ; Roche, J.* ; Kang-Yun, C.S.* ; Semrau, J.D.* ; Bobik, T.A.* ; Fulton, B.* ; Zischka, H. ; DiSpirito, A.A.*

MbnC is not required for the formation of the N-terminal oxazolone in the methanobactin from Methylosinus trichosporium OB3b.

Appl. Environ. Microbiol. 88:e0184121 (2022)

Dershwitz, P.* ; Bandow, N.L.* ; Yang, J.* ; Semrau, J.D.* ; McEllistrem, M.T.* ; Heinze, R.A.* ; Fonseca, M.* ; Ledesma, J.C.* ; Jennett, J.R.* ; DiSpirito, A.M.* ; Athwal, N.S.* ; Hargrove, M.S.* ; Bobik, T.A.* ; Zischka, H. ; DiSpirito, A.A.*

Oxygen generation via water splitting by a novel biogenic metal ion binding compound.

Appl. Environ. Microbiol. 87:e00286-21 (2021)

Anderson, A.C.* ; Rothballer, M. ; Altenburger, M.J.* ; Woelber, J.P.* ; Karygianni, L.* ; Vach, K.* ; Hellwig, E.* ; Al-Ahmad, A.*

Long-term fluctuation of oral biofilm microbiota following different dietary phases.

Appl. Environ. Microbiol. 86:e01421-20 (2020)

Weyrauch, P. ; Heker, I.* ; Zaytsev, A.V.* ; von Hagen, C.A.* ; Arnold, M.E.* ; Golding, B.T.* ; Meckenstock, R.U.*

The 5,6,7,8-tetrahydro-2-naphthoyl-CoA reductase reaction in the anaerobic degradation of naphthalene and identification of downstream metabolites.

Appl. Environ. Microbiol. 86:e00996-20 (2020)

Zhu, B. ; Bradford, L. ; Huang, S. ; Szalay, A.A. ; Leix, C.* ; Weissbach, M.* ; Táncsics, A.* ; Drewes, J.E.* ; Lueders, T.

Unexpected diversity and high abundance of putative nitric oxide dismutase (Nod) genes in contaminated aquifers and wastewater treatment systems.

Appl. Environ. Microbiol. 83, DOI: 10.1128/AEM.02750-16 (2017)

Gu, W.* ; Farhan Ul Haque, M.* ; Baral, B.S.* ; Turpin, E.A.* ; Bandow, N.L.* ; Kremmer, E. ; Flatley, A. ; Zischka, H. ; DiSpirito, A.A.* ; Semrau, J.D.*

A TonB-dependent transporter is responsible for methanobactin uptake by Methylosinus trichosporium OB3b.

Appl. Environ. Microbiol. 82, 1917-1923 (2016)

Zhang, P.* ; Xie, G.* ; Liu, X.* ; Ai, L.* ; Chen, Y.* ; Meng, X.* ; Bi, Y.* ; Chen, J.* ; Sun, Y.* ; Stöger, T. ; Ding, Z.* ; Yin, R.*

High genetic diversity of Newcastle disease virus in wild and domestic birds in Northeastern China from 2013 to 2015 reveals potential epidemic trends.

Appl. Environ. Microbiol. 82, 1530-1536 (2016)

Leberecht, M.* ; Dannenmann, M.* ; Gschwendtner, S. ; Bilela, S.* ; Meier, R.* ; Simon, J.* ; Rennenberg, H.* ; Schloter, M. ; Polle, A.*

Ectomycorrhizal communities on the roots of two beech (Fagus sylvatica) populations from contrasting climate differ in nitrogen acquisition in a common environment.

Appl. Environ. Microbiol. 81, 5957-5967 (2015)

Münch, K.M.* ; Müller, J. ; Wienecke, S.* ; Bergmann, S.* ; Heyber, S.* ; Biedendieck, R.* ; Münch, R.* ; Jahn, D.*

Polar fixation of plasmids during recombinant protein production in Bacillus megaterium results in population heterogeneity.

Appl. Environ. Microbiol. 81, 5976-5986 (2015)

Stets, M.I. ; Alqueres, S. ; Souza, E.M.* ; Pedrosa, F.O.* ; Schmid, M. ; Hartmann, A. ; Cruz, L.M.*

Quantification of Azospirillum brasilense FP2 in wheat roots by strain-specific qPCR.

Appl. Environ. Microbiol. 81, 6700-6709 (2015)

Szafranski, S.P.* ; Wos-Oxley, M.L.* ; Vilchez-Vargas, R.* ; Jáuregui, R.* ; Plumeier, I.* ; Klawonn, F.* ; Tomasch, J.* ; Meisinger, C. ; Kühnisch, J.* ; Sztajer, H.* ; Pieper, D.H.* ; Wagner-Döbler, I.*

High resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis.

Appl. Environ. Microbiol. 81, 1047-1058 (2015)

Grote, J.* ; Krysciak, D.* ; Schorn, A.* ; Dahlke, R.I.* ; Soonvald, L.* ; Müller, J. ; Hense, B.A. ; Schwarzfischer, M. ; Sauter, M.* ; Schmeisser, C.* ; Streit, W.R.*

Evidence of autoinducer-dependent and autoinducer-independent heterogeneous gene expression in Sinorhizobium fredii NGR234.

Appl. Environ. Microbiol. 80, 5572-5582 (2014)

Giebler, J.* ; Wick, L.Y.* ; Schloter, M. ; Harms, H.* ; Chatzinotas, A.*

Evaluating the assignment of alkB terminal restriction fragments and sequence types to distinct bacterial taxa.

Appl. Environ. Microbiol. 79, 3129-3132 (2013)

Gözdereliler, E. ; Boon, N.* ; Aamand, J.* ; de Roy, K.* ; Granitsiotis, M.S. ; Albrechtsen, H.J.* ; Sørensen, S.R.*

Comparing metabolic functionalities, community structures, and dynamics of herbicide-degrading communities cultivated with different substrate concentrations.

Appl. Environ. Microbiol. 79, 367-375 (2013)

Studt, L.* ; Schmidt, F.J.* ; Jahn, L.* ; Sieber, C.M.K. ; Connolly, L.R.* ; Niehaus, E.M.* ; Freitag, M.* ; Humpf, H.U.* ; Tudzynski, B.*

Two histone deacetylases, FfHda1 and FfHda2, are important for secondary metabolism and virulence in Fusarium fujikuroi.

Appl. Environ. Microbiol. 79, 7719-7734 (2013)

von Netzer, F. ; Pilloni, G. ; Kleindienst, S.* ; Krüger, M.* ; Knittel, K.* ; Gründger, F.* ; Lueders, T.

Enhanced gene detection assays for fumarate-adding enzymes allow uncovering of anaerobic hydrocarbon degraders in terrestrial and marine systems.

Appl. Environ. Microbiol. 79, 543-552 (2013)

Lalaouna, D.* ; Fochesato, S.* ; Sanchez, L.* ; Schmitt-Kopplin, P. ; Haas, D.* ; Heulin, T.* ; Achouak, W.*

Phenotypic switching in Pseudomonas brassicacearum involves GacS- and GacA-dependent Rsm small RNAs.

Appl. Environ. Microbiol. 78, 1658-1665 (2012)

Bannert, A. ; Kleineidam, K. ; Wissing, L.* ; Mueller-Niggemann, C.* ; Vogelsang, V.* ; Welzl, G. ; Cao, Z.* ; Schloter, M.

Changes in diversity and functional gene abundances of microbial communities involved in nitrogen fixation, nitrification, and denitrification in a tidal wetland versus paddy soils cultivated for different time periods.

Appl. Environ. Microbiol. 77, 6109-6116 (2011)

Beckmann, S.* ; Lüders, T. ; Krüger, M.* ; von Netzer, F. ; Engelen, B.* ; Cypionka, H.*

Acetogens and acetoclastic methanosarcinales govern methane formation in abandoned coal mines.

Appl. Environ. Microbiol. 77, 3749-3756 (2011)

Hemme, C.L.* ; Fields, M.W.* ; He, Q.* ; Deng, Y.* ; Lin, L.* ; Tu, Q.* ; Mouttaki, H. ; Zhou, A.* ; Feng, X.* ; Zuo, Z.* ; Ramsay, B.D.* ; He, Z.* ; Wu, L.* ; van Nostrand, J.* ; Xu, J.* ; Tang, Y.J.* ; Wiegel, J.* ; Phelps, T.J.* ; Zhou, J.*

Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields.

Appl. Environ. Microbiol. 77, 7998-8008 (2011)

Heuer, H.* ; Solehati, Q.* ; Zimmerling, U.* ; Kleineidam, K. ; Schloter, M. ; Müller, T.* ; Focks, A.* ; Thiele-Bruhn, S.* ; Smalla, K.

Accumulation of sulfonamide resistance genes in arable soils due to repeated application of manure containing sulfadiazine.

Appl. Environ. Microbiol. 77, 2527-2530 (2011)

Bosch, J. ; Heister, K.* ; Hofmann, T.* ; Meckenstock, R.U.

Nanosized iron oxide colloids strongly enhance microbial iron reduction.

Appl. Environ. Microbiol. 76, 184-189 (2010)

Müller, A.A.* ; Schmid, M.W. ; Meyer, O.* ; Meussdoerffer, F.G.*

Listeria seeligeri isolates from food processing environments form two phylogenetic lineages.

Appl. Environ. Microbiol. 76, 3044-3047 (2010)

Ollivier, J. ; Kleineidam, K. ; Reichel, R.* ; Thiele-Bruhn, S.* ; Kotzerke, A.* ; Kindler, R.* ; Wilke, B.-M.* ; Schloter, M.

Effect of sulfadiazine-contaminated pig manure on the abundances of genes and transcripts involved in nitrogen transformation in the root-rhizosphere complexes of maize and clover.

Appl. Environ. Microbiol. 76, 7903-7909 (2010)

Schreiner, K. ; Hagn, A. ; Kyselkova, M.* ; Moenne-Loccoz, Y.* ; Welzl, G. ; Munch, J.-C. ; Schloter, M.

Comparison of barley succession and take-all disease as environmental factors shaping the rhizobacterial community during take-all decline.

Appl. Environ. Microbiol. 76, 4703-4712 (2010)

Hai, B. ; Diallo, N.H.* ; Sall, S.* ; Haesler, F. ; Schauss, K. ; Bonzi, M.* ; Assigbetse, K.* ; Chotte, J.L.* ; Munch, J.-C. ; Schloter, M.

Quantification of key genes steering the microbial nitrogen cycle in the rhizosphere of sorghum cultivars in tropical agroecosystems.

Appl. Environ. Microbiol. 75, 4993-5000 (2009)

Weinert, N.* ; Meincke, R.* ; Gottwald, C.* ; Heuer, H.* ; Gomes, N.C.M.* ; Schloter, M. ; Berg, G.* ; Smalla, K.

Rhizosphere communities of genetically modified zeaxanthin-accumulating potato plants and their parent cultivar differ less than those of different potato cultivars.

Appl. Environ. Microbiol. 75, 3859-3865 (2009)

Winderl, C. ; Anneser, B. ; Griebler, C. ; Meckenstock, R.U. ; Lüders, T.

Depth-resolved quantification of anaerobic toluene degraders and aquifer microbial community patterns in distinct redox zones of a tar oil contaminant plume.

Appl. Environ. Microbiol. 74, 792-801 (2008)

Hoque, E. ; Pflugmacher, S.* ; Fritscher, J. ; Wolf, M.

Induction of Glutathione S-Transferase in Biofilms and Germinating Spores of Mucor hiemalis Strain EH5 from Cold Sulfidic Spring Waters.

Appl. Environ. Microbiol. 73, 2697-2707 (2007)

Lüders, T. ; Kindler, R.* ; Miltner, A.* ; Friedrich, M.W.*

Identification of bacterial micropredators distinctively active in a soil microbial food web.

Appl. Environ. Microbiol. 72, 5342-5348 (2006)

Penning, H. ; Claus, P.* ; Casper, P.* ; Conrad, R.*

Carbon isotope fractionation during acetoclastic methanogenesis by Methanosaeta concilii in culture and a lake sediment.

Appl. Environ. Microbiol. 72, 5648-5652 (2006)

Sharma, S. ; Szele, Z. ; Schilling, R. ; Munch, J.-C. ; Schloter, M.

Influence of freeze-thaw stress on the structure and function of microbial communities and denitrifying populations in soil.

Appl. Environ. Microbiol. 72, 2148-2154 (2006)

Smalla, K.* ; Haines, A.S.* ; Jones, K.* ; Krögerrecklenfort, E.* ; Heuer, H.* ; Schloter, M. ; Thomas, C.M.*

Increased abundance of IncP-1ß plasmids and mercury resistance genes in mercury-polluted river sediments: First discovery of IncP-1ß plasmids with a complex mer transposon as the sole accessory element.

Appl. Environ. Microbiol. 72, 7253-7259 (2006)

Jahn, M.K.* ; Haderlein, S.B.* ; Meckenstock, R.U.

Anaerobic degradation of benzene, toluene, ethylbenzene and o-xylene in sediment-free iron-reducing enrichment cultures.

Appl. Environ. Microbiol. 71, 3355-3358 (2005)

Loy, A.* ; Beisker, W. ; Meier, H.*

Diversity of bacteria growning in natural mineral water after bottling.

Appl. Environ. Microbiol. 71, 3624-3632 (2005)

Loy, A.* ; Schulz, C.* ; Lücker, S.* ; Schöpfer-Wendels, A. ; Stöcker, K.* ; Lehner, A.* ; Wagner, M.*

16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales".

Appl. Environ. Microbiol. 71, 1373-1386 (2005)

Selesi, D. ; Schmid, M. ; Hartmann, A.

Diversity of Green-Like and Red-like ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes (cbbL) in differently managed agricultural soils.

Appl. Environ. Microbiol. 71, 175-184 (2005)

Sharma, S. ; Aneja, M.K. ; Mayer, J.* ; Munch, J.-C. ; Schloter, M.

Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes.

Appl. Environ. Microbiol. 71, 2001-2007 (2005)

Dilly, O.* ; Bloem, J.* ; Vos, A.* ; Munch, J.-C.

Bacterial diversity in agricultural soils during litter decomposition.

Appl. Environ. Microbiol. 70, 468-474 (2004)

Lüders, T. ; Pommerenke, B.* ; Friedrich, M.W.*

Stable-isotope probing of microorganisms thriving at thermodynamic limits: Syntropic propionate oxidation in flooded soil.

Appl. Environ. Microbiol. 70, 5778-5786 (2004)

Morasch, B.* ; Richnow, H.H.* ; Vieth, A.* ; Schink, B.* ; Meckenstock, R.U.

Stable isotope fractionation caused by glycyl radical enzymes during bacterial degradation of aromatic compounds.

Appl. Environ. Microbiol. 70, 2935-2940 (2004)

Adamczyk, J.* ; Hesselsoe, M.* ; Iversen, N.* ; Horn, M.* ; Lehner, A.* ; Nielsen, P.H.* ; Schloter, M. ; Roslev, P.* ; Wagner, M.*

The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function.

Appl. Environ. Microbiol. 69, 6875-6887 (2003)

Bertaux, J.* ; Schmid, M. ; Prevost-Boure, N.C.* ; Churin, J.L.* ; Hartmann, A. ; Garbaye, J.* ; Frey-Klett, P.*

In situ identification of intracellular bacteria related to Paenibacillus spp. in the mycelium of the ectomycorrhizal fungus Laccaria bicolor S238N.

Appl. Environ. Microbiol. 69, 4243-4248 (2003)

Griebler, C.* ; Slezak, D.*

Microbial activity in aquatic environments measured by dimethyl sulfoxide reduction and intercomparison with commonly used methods.

Appl. Environ. Microbiol. 67, 100-109 (2001)

Steidle, A.* ; Sigl, K.* ; Schuhegger, R. ; Ihring, A.* ; Schmid, M.* ; Gantner, S. ; Stoffels, M. ; Riedel, K.* ; Givskov, M.* ; Hartmann, A. ; Langebartels, C. ; Eberl, L.*

Visualization of N-Acylhomoserine Lactone-Mediated Cell-Cell Communication between Bacteria Colonizing the Tomato Rhizosphere.

Appl. Environ. Microbiol. 67, 5761-5770 (2001)

Bach, H.-J. ; Errampalli, D.* ; Leung, K.T.* ; Lee, H.* ; Hartmann, A. ; Trevors, J.T.* ; Munch, J.-C.

Specific detection of the gene for the extracellular neutral protease of Bacillus cereus by PCR and blot hybridization.

Appl. Environ. Microbiol. 65, 3226-3228 (1999)

Schloter, M. ; Wiehe, W.* ; Aßmus, B. ; Steindl, H. ; Becke, H. ; Höflich, G.* ; Hartmann, A.

Root colonization of different plants by plant-growth-promoting Rhizobium leguminosarum bv. trifolii R39 studied with monospecific polyclonal antisera.

Appl. Environ. Microbiol. 63, 2038-2046 (1997)

Aßmus, B. ; Hutzler, P. ; Kirchhof, G. ; Amann, R. ; Lawrence, J.R.* ; Hartmann, A.

In situ localization of Azospirillum brasilense in the rhizosphere of wheat with fluorescently labeled, rRNA-targeted oligonucleotide probes and scanning confocal laser microscopy.

Appl. Environ. Microbiol. 61, 1013-1019 (1995)

Buff, K. ; Mano, D.M.S. ; Langenbach, T.