PuSH - Publikationsserver des Helmholtz Zentrums München

Klimenko, V.* ; Reiners, J.* ; Applegate, V.* ; Reimann, K.* ; Popowicz, G.M. ; Hoeppner, A.* ; Papadopoulos, A.* ; Smits, S.H.J.* ; Nowack, E.C.M.*

The Paulinella chromatophore transit peptide part2 adopts a structural fold similar to the γ-glutamyl-cyclotransferase fold.

Plant Physiol. 199, 9 (2025)

Zhou, Y.* ; Sommer, M.L.* ; Meyer, A.* ; Wang, D.* ; Klaus, A.* ; Stocker, T.* ; Marcon, C.* ; Schoof, H.* ; Haberer, G. ; Schön, C.C.* ; Yu, P.* ; Hochholdinger, F.*

Cold mediates maize root hair developmental plasticity via epidermis-specific transcriptomic responses.

Plant Physiol. 196, 2105-2120 (2024)

Guzha, A.* ; McGee, R.* ; Scholz, P.* ; Hartken, D.* ; Ludke, D.* ; Bauer, K. ; Wenig, M. ; Zienkiewicz, K.* ; Herrfurth, C.* ; Feussner, I.* ; Vlot, A.C. ; Wiermer, M.* ; Haughn, G.* ; Ischebeck, T.*

Cell wall-localized BETA-XYLOSIDASE4 contributes to immunity of Arabidopsis against Botrytis cinerea.

Plant Physiol. 189, 1794-1813 (2022)

Zangishei, Z.* ; Annacondia, M.L.* ; Gundlach, H. ; Didriksen, A.* ; Bruckmüller, J.* ; Salari, H.* ; Krause, K.* ; Martinez, G.J.*

Parasitic plant small RNA analyses unveil parasite-specific signatures of microRNA retention, loss, and gain.

Plant Physiol. 190, 1242-1259 (2022)

Ageeva-Kieferle, A. ; Georgii, E. ; Winkler, B. ; Ghirardo, A. ; Albert, A. ; Hüther, P.* ; Mengel, A. ; Becker, C.* ; Schnitzler, J.-P. ; Durner, J. ; Lindermayr, C.

Nitric oxide coordinates growth, development, and stress response via histone modification and gene expression.

Plant Physiol. 187, 336-360 (2021)

Veeragoni, S.R. ; Lange, B. ; Serrano, M.* ; Nawrath, C.* ; Bauer, S. ; Schäffner, A. ; Thordal-Christensen, H.* ; Durner, J. ; Gaupels, F.

Mutant muddle: Some arabidopsis eds5 mutant lines have a previously unnoticed second-site mutation in FAH1.

Plant Physiol. 182, 460-462 (2020)

Begcy, K.* ; Nosenko, T. ; Zhou, L.Z.* ; Fragner, L.* ; Weckwerth, W.* ; Dresselhaus, T.*

Male sterility in maize caused by transient heat stress during the tetrad stage of pollen development.

Plant Physiol. 181, 683-700 (2019)

Kaling, M. ; Schmidt, A.* ; Moritz, F. ; Rosenkranz, M. ; Witting, M. ; Kasper, K.* ; Janz, D.* ; Schmitt-Kopplin, P. ; Schnitzler, J.-P. ; Polle, A.*

Mycorrhiza-triggered transcriptomic and metabolomic networks impinge on herbivore fitness.

Plant Physiol. 176, 2639-2656 (2018)

Mayer, D. ; Mithöfer, A.* ; Glawischnig, E.* ; Georgii, E. ; Ghirardo, A. ; Kanawati, B. ; Schmitt-Kopplin, P. ; Schnitzler, J.-P. ; Durner, J. ; Gaupels, F.

Short-term exposure to nitrogen dioxide provides basal pathogen resistance.

Plant Physiol. 178, 468-487 (2018)

Friesner, J.* ; Assmann, S.M.* ; Bastow, R.* ; Bailey-Serres, J.* ; Beynon, J.* ; Brendel, V.* ; Buell, C.R.* ; Bucksch, A.* ; Busch, W.* ; Demura, T.* ; Dinneny, J.R.* ; Doherty, C.J.* ; Eveland, A.L.* ; Falter-Braun, P. ; Gehan, M.A.* ; Gonzales, M.* ; Grotewold, E.* ; Gutiérrez, R.A.* ; Krämer, U.* ; Krouk, G.* ; Ma, S.L.* ; Markelz, R.J.C.* ; Megraw, M.* ; Meyers, B.C.* ; Murray, J.A.H.* ; Provart, N.J.* ; Rhee, S.* ; Smith, R.* ; Spalding, E.P.* ; Taylor, C.* ; Teal, T.K.* ; Torii, K.U.* ; Town, C.* ; Vaughn, M.* ; Vierstra, R.* ; Ware, D.* ; Wilkins, O.* ; Williams, C.* ; Brady, S.M.*

The next generation of training for arabidopsis researchers: Bioinformatics and quantitative biology.

Plant Physiol. 175, 1499-1509 (2017)

Grübler, B.* ; Merendino, L.* ; Twardziok, S.O. ; Mininno, M.* ; Allorent, G.* ; Chevalier, F.* ; Liebers, M.* ; Blanvillain, R.* ; Mayer, K.F.X. ; Lerbs-Mache, S.* ; Ravanel, S.* ; Pfannschmidt, T.*

Light and plastid signals regulate different sets of genes in the albino mutant pap7-1.

Plant Physiol. 175, 1203-1219 (2017)

Mengel, A. ; Ageeva-Kieferle, A. ; Georgii, E. ; Bernhardt, J.* ; Wu, K.M.* ; Durner, J. ; Lindermayr, C.

Nitric oxide modulates histone acetylation at stress genes by inhibition of histone deacetylases.

Plant Physiol. 173, 1434-1452 (2017)

Carella, P.* ; Merl-Pham, J. ; Wilson, D.C.* ; Dey, S. ; Hauck, S.M. ; Vlot, A.C. ; Cameron, R.K.*

Comparative proteomics analysis of Arabidopsis phloem exudates collected during the induction of systemic acquired resistance.

Plant Physiol. 171, 1495-1510 (2016)

Das, M. ; Haberer, G. ; Panda, A.* ; Laha, S.D.* ; Ghosh, T.C.* ; Schäffner, A.

Expression pattern similarities support the prediction of orthologs retaining common functions after gene duplication events.

Plant Physiol. 171, 2343-2357 (2016)

Vanzo, E. ; Merl-Pham, J. ; Velikova, V.B. ; Ghirardo, A. ; Lindermayr, C. ; Hauck, S.M. ; Bernhardt, J.* ; Riedel, K.* ; Durner, J. ; Schnitzler, J.-P.

Modulation of protein S-nitrosylation by isoprene emission in poplar.

Plant Physiol. 170, 1945-1961 (2016)

Lindermayr, C. ; Durner, J.

Interplay of reactive oxygen species and nitric oxide: Nitric oxide coordinates reactive oxygen species homeostasis.

Plant Physiol. 167, 1209-1210 (2015)

Scheler, C. ; Weitbrecht, K.* ; Pearce, S.P.* ; Hampstead, A.* ; Büttner-Mainik, A.* ; Lee, K.J.D.* ; Voegele, A.* ; Oracz, K.* ; Dekkers, B.J.W.* ; Wang, X.* ; Wood, A.T.A.* ; Bentsink, L.* ; King, J.R.* ; Knox, J.P.* ; Holdsworth, M.J.* ; Müller, K.B.* ; Leubner-Metzger, G.*

Promotion of testa rupture during garden cress germination involves seed compartment-specific expression and activity of pectin methylesterases.

Plant Physiol. 167, 200-215 (2015)

Vanzo, E. ; Jud, W.* ; Li, Z.* ; Albert, A. ; Domagalska, M.A.* ; Ghirardo, A. ; Niederbacher, B. ; Frenzel, J.* ; Beemster, G.T.* ; Asard, H.* ; Rennenberg, H.* ; Sharkey, T.D.* ; Hansel, A.* ; Schnitzler, J.-P.

Facing the future - effects of short-term climate extremes on isoprene-emitting and non-emitting poplar.

Plant Physiol. 169, 560-575 (2015)

Velikova, V.B. ; Müller, C. ; Ghirardo, A. ; Rock, T. ; Aichler, M. ; Walch, A.K. ; Schmitt-Kopplin, P. ; Schnitzler, J.-P.

Knocking down of isoprene emission modifies the lipid matrix of thylakoid membranes and influences the chloroplast ultrastructure in poplar.

Plant Physiol. 168, 859-870 (2015)

Ariyadasa, R.* ; Mascher, M.* ; Nussbaumer, T. ; Schulte, D.* ; Frenkel, Z.* ; Poursarebani, N.* ; Zhou, R.* ; Steuernagel, B.* ; Gundlach, H. ; Taudien, S.* ; Felder, M.* ; Platzer, M.* ; Himmelbach, A.* ; Schmutzer, T.* ; Hedley, P.* ; Muehlbauer, G.* ; Scholz, U.* ; Korol, A.* ; Mayer, K.F.X. ; Waugh, R.* ; Langridge, P.* ; Graner, A.* ; Stein, N.*

A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms.

Plant Physiol. 164, 412-423 (2014)

Behringer, C.* ; Bastakis, E.* ; Ranftl, Q.* ; Mayer, K.F.X. ; Schwechheimer, C.*

Functional diversification within the family of B-GATA transcription factors through the LLM-domain.

Plant Physiol. 166, 293-305 (2014)

Breitenbach, H.H. ; Wenig, M. ; Wittek, F. ; Jordá, L.* ; Maldonado-Alconada, A.M.* ; Sarioglu, H. ; Colby, T.V.* ; Knappe, C. ; Bichlmeier, M. ; Pabst, E. ; Mackey, D.M.* ; Parker, J.E.* ; Vlot, A.C.

Contrasting roles of the apoplastic aspartyl protease APOPLASTIC, ENHANCED DISEASE SUSCEPTIBILITY1-DEPENDENT1 and LEGUME LECTIN-LIKE PROTEIN1 in arabidopsis systemic acquired resistance.

Plant Physiol. 165, 791-809 (2014)

Demko, V.* ; Perroud, P.F.* ; Johansen, W.* ; Delwiche, C.F.* ; Cooper, E.D.* ; Remme, P.* ; Ako, A.E.* ; Kugler, K.G. ; Mayer, K.F.X. ; Quatrano, R.S.* ; Olsen, O.A.*

Genetic analysis of DEK1 loop function in three-dimensional body patterning in physcomitrella patens.

Plant Physiol. 166, 903-919 (2014)

Dey, S. ; Wenig, M. ; Langen, G.* ; Sharma, S. ; Kugler, K.G. ; Knappe, C. ; Hause, B.* ; Bichlmeier, M. ; Babaeizad, V.* ; Imani, J.* ; Janzik, I.* ; Stempfl, T.* ; Hueckelhoven, R.* ; Kogel, K.H.* ; Mayer, K.F.X. ; Vlot, A.C.

Bacteria-triggered systemic immunity in barley appears to be associated with WRKY and ETHYLENE RESPONSIVE FACTORs but not with salicylic acid.

Plant Physiol. 166, 2133-2151 (2014)

Ghirardo, A. ; Wright, L.P.* ; Bi, Z. ; Rosenkranz, M. ; Pulido, P.* ; Rodríguez-Concepción, M.* ; Niinemets, U.* ; Brüggemann, N.* ; Gershenzon, J.* ; Schnitzler, J.-P.

Metabolic flux analysis of plastidic isoprenoid biosynthesis in poplar leaves emitting and non-emitting isoprene.

Plant Physiol. 165, 37-51 (2014)

Wright, L.P.* ; Rohwer, J.M.* ; Ghirardo, A. ; Hammerbacher, A.* ; Ortiz, M.* ; Raguschke, B.* ; Schnitzler, J.-P. ; Gershenzon, J.* ; Phillips, M.A.*

1-Deoxyxylulose 5-phosphate synthase controls flux through the 2-C-methylerythritol 4-phosphate pathway in Arabidopsis thaliana.

Plant Physiol. 165, 1488-1504 (2014)

Hakenjos, J.P.* ; Bejai, S.* ; Ranftl, Q.* ; Behringer, C.* ; Vlot, A.C. ; Absmanner, B.* ; Hammes, U.* ; Heinzlmeir, S.* ; Kuster, B.* ; Schwechheimer, C.*

ML3 is a NEDD8- and ubiquitin-modified protein.

Plant Physiol. 163, 135-149 (2013)

Kopecky, D.* ; Martis, M.M. ; Cihalikova, J.* ; Hribova, E.* ; Vrana, J.* ; Bartos, J.* ; Kopecka, J.* ; Cattonaro, F.* ; Stoces, S.* ; Novak, P.* ; Neumann, P.* ; Macas, J.* ; Šimková, H.* ; Studer, B.* ; Asp, T.* ; Baird, J.H.* ; Navratil, P.* ; Karafiatova, M.* ; Kubaláková, M.* ; Safar, J.* ; Mayer, K.F.X. ; Dolezel, J.*

Flow sorting and sequencing meadow fescue chromosome 4F.

Plant Physiol. 163, 1323-1337 (2013)

Pfeifer, M. ; Martis, M.M. ; Asp, T.* ; Mayer, K.F.X. ; Lübberstedt, T.* ; Byrne, S.* ; Frei, U.* ; Studer, B.*

The Perennial Ryegrass GenomeZipper - targeted use of genome resources for comparative grass genomics.

Plant Physiol. 161, 571-582 (2013)

Fröhlich, A. ; Gaupels, F. ; Sarioglu, H. ; Holzmeister, C. ; Spannagl, M. ; Durner, J. ; Lindermayr, C.

Looking deep inside: Detection of low-abundance proteins in leaf extracts of arabidopsis and phloem exudates of pumpkin.

Plant Physiol. 159, 902-914 (2012)

Gaupels, F. ; Sarioglu, H. ; Beckmann, M.* ; Hause, B.* ; Spannagl, M. ; Draper, J.* ; Lindermayr, C. ; Durner, J.

Deciphering systemic wound responses of the pumpkin extrafascicular phloem by metabolomics and stable isotope-coded protein labeling.

Plant Physiol. 160, 2285-2299 (2012)

Leister, D.* ; Wang, X. ; Haberer, G. ; Mayer, K.F.X. ; Kleine, T.*

Intracompartmental and intercompartmental transcriptional networks coordinate the expression of genes for organellar functions.

Plant Physiol. 157, 386-404 (2011)

Palmieri, M.C. ; Lindermayr, C. ; Bauwe, H.* ; Steinhauser, C. ; Durner, J.

Regulation of plant glycine decarboxylase by s-nitrosylation and glutathionylation.

Plant Physiol. 152, 1514-1528 (2010)

Postaire, O.* ; Tournaire-Roux, C.* ; Grondin, A.* ; Boursiac, Y.* ; Morillon, R.* ; Schäffner, A. ; Maurel, C.*

A PIP1 aquaporin contributes to hydrostatic pressure-induced water transport in both the root and rosette of Arabidopsis.

Plant Physiol. 152, 1418-1430 (2010)

Mayer, K.F.X. ; Taudien, S.* ; Martis, M.M. ; Šimková, H.* ; Suchánková, P.* ; Gundlach, H. ; Wicker, T.* ; Petzold, A.* ; Felder, M.* ; Steuernagel, B.* ; Scholz, U.* ; Graner, A.* ; Platzer, M.* ; Dolezel, J.* ; Stein, N.*

Gene content and virtual gene order of barley chromosome 1H.

Plant Physiol. 151, 496-505 (2009)

Pogány, M. ; von Rad, U. ; Grün, S. ; Dongó, A.* ; Pintye, A.* ; Simoneau, P.* ; Bahnweg, G. ; Kiss, L.* ; Barna, B.* ; Durner, J.

Dual roles of reactive oxygen species and NADPH oxidase RBOHD in an Arabidopsis-Alternaria pathosystem.

Plant Physiol. 151, 1459-1475 (2009)

Haberer, G. ; Mader, M.T. ; Kosarev, P. ; Spannagl, M. ; Yang, L. ; Mayer, K.F.X.

Large-scale cis-element detection by analysis of correltaed expression and sequence conservation between arabidopsis and Brassica oleracea.

Plant Physiol. 142, 1589-1602 (2006)

Haberer, G. ; Gundlach, H. ; Mayer, K.F.X.

Structure and architecture of the Maize genome.

Plant Physiol. 139, 1612-1624 (2005)

Lindermayr, C. ; Saalbach, G.* ; Durner, J.

Proteomic identification of S-nitrosylated proteins in Arabidopsis.

Plant Physiol. 137, 921-930 (2005)

Loeffler, C.* ; Berger, S.* ; Guy, A.* ; Durand, T.* ; Bringmann, G.* ; Dreyer, M.* ; von Rad, U. ; Durner, J. ; Mueller, M.J.*

B1-phytoprostanes trigger plant defense and detoxification responses.

Plant Physiol. 137, 328-340 (2005)

Schoof, H. ; Spannagl, M. ; Yang, L. ; Ernst, R. ; Gundlach, H. ; Haase, H. ; Haberer, G. ; Mayer, K.F.X.

Munich Information Center for Protein Sequences Plant Genome Resources. A Framework for Integrative and Comparative Analyses.

Plant Physiol. 138, 1301-1309 (2005)

Vanderauwera, S.* ; Zimmermann, P.* ; Rombauts, S.* ; Vandenabeele, S.* ; Langebartels, C. ; Gruissem, W.* ; Inzé, D.* ; van Breusegem, F.*

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis.

Plant Physiol. 139, 806-821 (2005)

Wilkinson, M.* ; Schoof, H. ; Ernst, R. ; Haase, D.

BioMOBY successfully integrates distributed heterogeneous bioinformatics Web services. The plaNet exemplar case.

Plant Physiol. 138, 5-17 (2005)

Haberer, G. ; Hindemitt, T. ; Meyers, B.C.* ; Mayer, K.F.X.

Transcriptional similarities, dissimilarities and conservation of cis-elements in duplicated genes of Arabidopsis.

Plant Physiol. 136, 3009-3022 (2004)

Lamotte, O.* ; Gould, D.* ; Lecourieux, D.* ; Sequeira-Legrand, A.* ; Lebrun-Garcia, A.* ; Durner, J. ; Pugin, A.* ; Wendehenne, D.*

Analysis of nitric oxide signaling functions in tobacco cells challenged by the elicitor cryptogein.

Plant Physiol. 135, 516-529 (2004)

Rudd, S. ; Frisch, M.* ; Grote, K.* ; Meyers, B.C.* ; Mayer, K.F.X. ; Werner, T.*

Genome-wide in silico mapping of scaffold/matrix attachment regions in Arabidopsis suggests correlation of intragenic scaffold/matrix attachment regions with gene expression.

Plant Physiol. 135, 715-722 (2004)

Moeder, W. ; Barry, C.S.* ; Tauriainen, A.A.* ; Betz, C. ; Tuomainen, J.* ; Utrianen, M.* ; Grierson, D.* ; Sandermann, H. ; Langebartels, C. ; Kangasjärvi, J.*

Ethylene synthesis regulated by biphasic induction of 1-aminocyclopropane-1-carboxylic acid synthase and 1-aminocyclopropane-1-carboxylic acid oxidase genes is regulated for hydrogen peroxide accumulation and cell death in ozone-exposed tomato.

Plant Physiol. 130, 1-9 (2002)

Chiron, H.* ; Drouet, A.* ; Lieutier, F.* ; Payer, H.-D. ; Ernst, D. ; Sandermann, H.

Gene induction of stilbene biosynthesis in scots pine in response to ozone treatment, wounding and fungal infection.

Plant Physiol. 124, 865-872 (2000)

Havaux, M.* ; Bonfils, J.P.* ; Lütz, C.* ; Niyogi, K.K.*

Photodamage of the photosynthetic apparatus and its dependence on the leaf developmental stage in the npq1 Arabidopsis mutant deficient in the xanthophyll cycle enzyme violaxanthin de-epoxidase.

Plant Physiol. 124, 273-284 (2000)

Navarre, D.A.* ; Wendehenne, D.* ; Durner, J. ; Noad, R.* ; Klessig, D.F.*

Nitric Oxide Modulates the Activity of Tobacco Aconitase.

Plant Physiol. 122, 573-582 (2000)

Eckey-Kaltenbach, H. ; Ernst, D. ; Heller, W. ; Sandermann, H.