document.write("
"); document.write("
Ratajczak,\ F.\ ; Joblin,\ M.*\ ; Ringsquandl,\ M.*\ ; Hildebrandt,\ M.*
"); document.write("
Task-driven knowledge graph filtering improves prioritizing drugs for repurposing.
"); document.write("
BMC Bioinformatics 23:84 (2022)
"); document.write("
"); document.write("
"); document.write("
Amrhein,\ L.\ ; Fuchs,\ C.
"); document.write("
stochprofML: Stochastic profiling using maximum likelihood estimation in R.
"); document.write("
BMC Bioinformatics 22:123 (2021)
"); document.write("
"); document.write("
"); document.write("
Waibel,\ D.J.E.\ ; Shetab Boushehri,\ S.\ ; Marr,\ C.
"); document.write("
InstantDL: An easy-to-use deep learning pipeline for image segmentation and classification.
"); document.write("
BMC Bioinformatics 22:103 (2021)
"); document.write("
"); document.write("
"); document.write("
Dony,\ L.\ ; He,\ F.*\ ; Stumpf,\ M.P.H.*
"); document.write("
Parametric and non-parametric gradient matching for network inference: A comparison.
"); document.write("
BMC Bioinformatics 20:52 (2019)
"); document.write("
"); document.write("
"); document.write("
Thiel,\ D.*\ ; Conrad,\ N.D.*\ ; Ntini,\ E.*\ ; Peschutter,\ R.X.*\ ; Siebert,\ H.*\ ; Marsico,\ A.
"); document.write("
Identifying lncRNA-mediated regulatory modules via ChIA-PET network analysis.
"); document.write("
BMC Bioinformatics 20:292 (2019)
"); document.write("
"); document.write("
"); document.write("
Keilwagen,\ J.*\ ; Hartung,\ F.*\ ; Paulini,\ M.*\ ; Twardziok,\ S.O.\ ; Grau,\ J.*
"); document.write("
Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi.
"); document.write("
BMC Bioinformatics 19:189 (2018)
"); document.write("
"); document.write("
"); document.write("
Molnos,\ S.\ ; Baumbach,\ C.\ ; Wahl,\ S.\ ; Müller-Nurasyid,\ M.\ ; Strauch,\ K.\ ; Wang-Sattler,\ R.\ ; Waldenberger,\ M.\ ; Meitinger,\ T.\ ; Adamski,\ J.\ ; Kastenmüller,\ G.\ ; Suhre,\ K.\ ; Peters,\ A.\ ; Grallert,\ H.\ ; Theis,\ F.J.\ ; Gieger,\ C.
"); document.write("
\pulver\: An R package for parallel ultra-rapid \p\-value computation for linear regression interaction terms.
"); document.write("
BMC Bioinformatics 18:429 (2017)
"); document.write("
"); document.write("
"); document.write("
Hahn,\ K.R.\ ; Massopust,\ P.\ ; Prigarin,\ S.M.*
"); document.write("
A new method to measure complexity in binary or weighted networks and applications to functional connectivity in the human brain.
"); document.write("
BMC Bioinformatics 17:87 (2016)
"); document.write("
"); document.write("
"); document.write("
Karapiperis,\ C.*\ ; Kempf,\ S.J.\ ; Quintens,\ R.*\ ; Azimzadeh,\ O.\ ; Vidal,\ V.L.*\ ; Pazzaglia,\ S.*\ ; Bazyka,\ D.*\ ; Mastroberardino,\ P.G.*\ ; Scouras,\ Z.G.*\ ; Tapio,\ S.\ ; Benotmane,\ M.A.*\ ; Ouzounis,\ C.A.*
"); document.write("
Brain Radiation Information Data Exchange (BRIDE): Integration of experimental data from low-dose ionising radiation research for pathway discovery.
"); document.write("
BMC Bioinformatics 17:212 (2016)
"); document.write("
"); document.write("
"); document.write("
Liu,\ Y.\ ; Smirnov,\ K.\ ; Lucio,\ M.\ ; Gougeon,\ R.D.*\ ; Alexandre,\ H.*\ ; Schmitt-Kopplin,\ P.
"); document.write("
MetICA: Independent component analysis for high-resolution mass-spectrometry based non-targeted metabolomics.
"); document.write("
BMC Bioinformatics 17:114 (2016)
"); document.write("
"); document.write("
"); document.write("
Weinhold,\ L.*\ ; Wahl,\ S.\ ; Pechlivanis,\ S.*\ ; Hoffmann,\ P.*\ ; Schmid,\ M.*
"); document.write("
A statistical model for the analysis of beta values in DNA methylation studies.
"); document.write("
BMC Bioinformatics 17:480 (2016)
"); document.write("
"); document.write("
"); document.write("
Heinig,\ M.*\ ; Colomé-Tatché,\ M.*\ ; Taudt,\ A.*\ ; Rintisch,\ C.*\ ; Schäfer,\ S.*\ ; Pravenec,\ M.*\ ; Hubner,\ N.*\ ; Vingron,\ M.*\ ; Johannes,\ F.*
"); document.write("
histoneHMM: Differential analysis of histone modifications with broad genomic footprints.
"); document.write("
BMC Bioinformatics 16:60 (2015)
"); document.write("
"); document.write("
"); document.write("
Kristensen,\ D.M.*\ ; Saeed,\ U.\ ; Frishman,\ D.\ ; Koonin,\ E.V.*
"); document.write("
A census of \α-helical membrane proteins in double-stranded DNA viruses infecting bacteria and archaea.
"); document.write("
BMC Bioinformatics 16:380 (2015)
"); document.write("
"); document.write("
"); document.write("
Feigelman,\ J.\ ; Theis,\ F.J.\ ; Marr,\ C.
"); document.write("
MCA: Multiresolution Correlation Analysis, a graphical tool for subpopulation identification in single-cell gene expression data.
"); document.write("
BMC Bioinformatics 15:240 (2014)
"); document.write("
"); document.write("
"); document.write("
Wahl,\ S.\ ; Fenske,\ N.*\ ; Zeilinger,\ S.\ ; Suhre,\ K.\ ; Gieger,\ C.\ ; Waldenberger,\ M.\ ; Grallert,\ H.\ ; Schmid,\ M.*
"); document.write("
On the potential of models for location and scale for genome-wide DNA methylation data.
"); document.write("
BMC Bioinformatics 15:232 (2014)
"); document.write("
"); document.write("
"); document.write("
Buggenthin,\ F.\ ; Marr,\ C.\ ; Schwarzfischer,\ M.\ ; Hoppe,\ P.S.\ ; Hilsenbeck,\ O.\ ; Schroeder,\ T.\ ; Theis,\ F.J.
"); document.write("
An automatic method for robust and fast cell detection in bright field images from high-throughput microscopy.
"); document.write("
BMC Bioinformatics 14:297 (2013)
"); document.write("
"); document.write("
"); document.write("
Hock,\ S.\ ; Hasenauer,\ J.\ ; Theis,\ F.J.
"); document.write("
Modeling of 2D diffusion processes based on microscopy data: Parameter estimation and practical identifiability analysis.
"); document.write("
BMC Bioinformatics 14:S7 (2013)
"); document.write("
"); document.write("
"); document.write("
Vehlow,\ C.*\ ; Hasenauer,\ J.\ ; Krämer,\ A.*\ ; Raue,\ A.\ ; Hug,\ S.\ ; Timmer,\ J.*\ ; Radde,\ N.*\ ; Theis,\ F.J.\ ; Weiskopf,\ D.*
"); document.write("
iVUN: Interactive Visualization of Uncertain biochemical reaction Networks.
"); document.write("
BMC Bioinformatics 14:S2 (2013)
"); document.write("
"); document.write("
"); document.write("
Petersen,\ A.-K.\ ; Krumsiek,\ J.\ ; Wägele,\ B.\ ; Theis,\ F.J.\ ; Wichmann,\ H.-E.\ ; Gieger,\ C.\ ; Suhre,\ K.
"); document.write("
On the hypothesis-free testing of metabolite ratios in genome-wide and metabolome-wide association studies.
"); document.write("
BMC Bioinformatics 13:120 (2012)
"); document.write("
"); document.write("
"); document.write("
van Wieringen,\ W.N.*\ ; Unger,\ K.\ ; Leday,\ G.G.R.*\ ; Krijgsman,\ O.*\ ; de Menezes,\ R.X.*\ ; Ylstra,\ B.*\ ; van de Wiel,\ M.A.*
"); document.write("
Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses.
"); document.write("
BMC Bioinformatics 13:80 (2012)
"); document.write("
"); document.write("
"); document.write("
Hasenauer,\ J.*\ ; Waldherr,\ S.*\ ; Doszczak,\ M.*\ ; Radde,\ N.*\ ; Scheurich,\ P.*\ ; Allgöwer,\ F.*
"); document.write("
Identification of models of heterogeneous cell populations from population snapshot data.
"); document.write("
BMC Bioinformatics 12:125 (2011)
"); document.write("
"); document.write("
"); document.write("
Knapp,\ B.*\ ; Rebhan,\ I.*\ ; Kumar,\ A.*\ ; Matula,\ P.*\ ; Kiani,\ N.A.*\ ; Binder,\ M.*\ ; Erfle,\ H.*\ ; Rohr,\ K.B.*\ ; Eils,\ R.*\ ; Bartenschlager,\ R.*\ ; Kaderali,\ L.*
"); document.write("
Normalizing for individual cell population context in the analysis of high-content cellular screens.
"); document.write("
BMC Bioinformatics 12:485 (2011)
"); document.write("
"); document.write("
"); document.write("
Forer,\ L.*\ ; Schönherr,\ S.*\ ; Weissensteiner,\ H.*\ ; Haider,\ F.*\ ; Kluckner,\ T.*\ ; Gieger,\ C.\ ; Wichmann,\ H.-E.\ ; Specht,\ G.*\ ; Kronenberg,\ F.*\ ; Kloss-Brandstätter,\ A.*
"); document.write("
CONAN: Copy number variation analysis software for genome-wide association studies.
"); document.write("
BMC Bioinformatics 11:318 (2010)
"); document.write("
"); document.write("
"); document.write("
Hartsperger,\ M.L.\ ; Blöchl,\ F.\ ; Stuempflen,\ V.\ ; Theis,\ F.J.
"); document.write("
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs.
"); document.write("
BMC Bioinformatics 11:522 (2010)
"); document.write("
"); document.write("
"); document.write("
Kowarsch,\ A.\ ; Blöchl,\ F.\ ; Bohl,\ S.*\ ; Saile,\ M.*\ ; Gretz,\ N.*\ ; Klingmüller,\ U.*\ ; Theis,\ F.J.
"); document.write("
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation.
"); document.write("
BMC Bioinformatics 11:585 (2010)
"); document.write("
"); document.write("
"); document.write("
Krumsiek,\ J.\ ; Pölsterl,\ S.\ ; Wittmann,\ D.M.\ ; Theis,\ F.J.
"); document.write("
Odefy - from discrete to continuous models.
"); document.write("
BMC Bioinformatics 11, 1-10:233 (2010)
"); document.write("
"); document.write("
"); document.write("
Sturm,\ M.\ ; Hackenberg,\ M.*\ ; Langenberger,\ D.*\ ; Frishman,\ D.
"); document.write("
TargetSpy: A supervised machine learning approach for microRNA target prediction.
"); document.write("
BMC Bioinformatics 11:292 (2010)
"); document.write("
"); document.write("
"); document.write("
Hao,\ P.*\ ; Zheng,\ S.*\ ; Ping,\ J.*\ ; Tu,\ K.*\ ; Gieger,\ C.\ ; Wang-Sattler,\ R.\ ; Zhong,\ Y.*\ ; Li,\ Y.*
"); document.write("
Human gene expression sensitivity according to large scale meta-analysis.
"); document.write("
BMC Bioinformatics 10, Suppl.1:S56 (2009)
"); document.write("
"); document.write("
"); document.write("
Lutter,\ D.*\ ; Ugocsai,\ P.*\ ; Grandl,\ M.*\ ; Orso,\ E.*\ ; Theis,\ F.J.*\ ; Lang,\ E.W.*\ ; Schmitz,\ G.*
"); document.write("
Analyzing M-CSF dependent monocyte/macrophage differentiation: expression modes and meta-modes derived from an independent component analysis.
"); document.write("
BMC Bioinformatics 9:100 (2008)
"); document.write("
"); document.write("
"); document.write("
Maier,\ H.\ ; Lengger,\ C.\ ; Simic,\ B.*\ ; Fuchs,\ H.\ ; Gailus-Durner,\ V.\ ; Hrabě de Angelis,\ M.
"); document.write("
MausDB: An open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects.
"); document.write("
BMC Bioinformatics 9:169 (2008)
"); document.write("
"); document.write("
"); document.write("
Artamonova,\ I.I.\ ; Frishman,\ G.\ ; Frishman,\ D.
"); document.write("
Applying negative rule mining to improve genome annotation.
"); document.write("
BMC Bioinformatics 8:261 (2007)
"); document.write("
"); document.write("
"); document.write("
Klee,\ K.\ ; Ernst,\ R.\ ; Spannagl,\ M.\ ; Mayer,\ K.F.X.
"); document.write("
Apollo2Go: A web service adapter for the Apollo genome viewer to enable distributed genome annotation.
"); document.write("
BMC Bioinformatics 8:320 (2007)
"); document.write("
"); document.write("
"); document.write("
Neverov,\ A.D.*\ ; Artamonova,\ I.I.\ ; Nurtdinov,\ R.N.*\ ; Frishman,\ D.\ ; Gelfand,\ M.S.*\ ; Mironov,\ A.A.*
"); document.write("
Alternative splicing and protein function.
"); document.write("
BMC Bioinformatics 6:266 (2005)
"); document.write("
"); document.write("
"); document.write("
Tetko,\ I.V.\ ; Facius,\ A.\ ; Ruepp,\ A.\ ; Mewes,\ H.-W.
"); document.write("
Super paramagnetic clustering of protein sequences.
"); document.write("
BMC Bioinformatics 6:82 (2005)
"); document.write("
"); document.write("
"); document.write("
Wjst,\ M.
"); document.write("
Target SNP selection in complex disease association studies.
"); document.write("
BMC Bioinformatics 5:92 (2004)
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");