PuSH - HMGU Publikationen https://push-zb.helmholtz-munich.de PuSH - Publikationen-Server des Helmholtz Zentrums München de-de <![CDATA[Gasparin, F. et al. Differentiation of sphingomyelin and cholesterol by hyperspectral mid-infrared detection of single-bond vibrational modes in the fingerprint region. Nat. Methods 23, 815-822 (2026)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=77467&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=77467&la=de Wed, 08 Apr 2026 00:00:00 +0000 <![CDATA[Gasparin, F. & Ntziachristos, V. Optoacoustic microscopy for detecting lipid fingerprints in living cells. Nat. Methods 23, 701–702 (2026)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=77563&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=77563&la=de Thu, 23 Apr 2026 00:00:00 +0000 <![CDATA[Haas, D. et al. C-COMPASS: A user-friendly neural network tool profiles cell compartments at protein and lipid levels. Nat. Methods, DOI: 10.1038/s41592-025-02880-3 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76189&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76189&la=de Mon, 08 Dec 2025 00:00:00 +0000 <![CDATA[Heumos, L. et al. Pertpy: An end-to-end framework for perturbation analysis. Nat. Methods, 30 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76415&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76415&la=de Wed, 28 Jan 2026 00:00:00 +0000 <![CDATA[Hingerl, J.C.* et al. scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution. Nat. Methods, DOI: 10.1038/s41592-025-02854-5 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=74377&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=74377&la=de Thu, 23 Oct 2025 00:00:00 +0000 <![CDATA[Ma, R. et al. A telescopic microscope equipped with a quanta image sensor for live-cell bioluminescence imaging. Nat. Methods, DOI: 10.1038/s41592-025-02694-3 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=74843&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=74843&la=de Mon, 02 Jun 2025 00:00:00 +0000 <![CDATA[Salas, S.M. et al. Optimizing Xenium In Situ data utility by quality assessment and best-practice analysis workflows. Nat. Methods 22, 813-823 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73690&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73690&la=de Thu, 08 May 2025 00:00:00 +0000 <![CDATA[Tejada Lapuerta, A. et al. Nicheformer: A foundation model for single-cell and spatial omics. Nat. Methods, DOI: 10.1038/s41592-025-02814-z (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75928&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75928&la=de Mon, 03 Nov 2025 00:00:00 +0000 <![CDATA[Vonficht, D.* et al. Ultra-high-scale cytometry-based cellular interaction mapping. Nat. Methods 22, 1887–1899 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75324&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75324&la=de Fri, 10 Oct 2025 00:00:00 +0000 <![CDATA[Zappia, L. et al. Feature selection methods affect the performance of scRNA-seq data integration and querying. Nat. Methods 22, 834-844 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73689&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73689&la=de Thu, 08 May 2025 00:00:00 +0000 <![CDATA[Caporale, N.* et al. Multiplexing cortical brain organoids for the longitudinal dissection of developmental traits at single-cell resolution. Nat. Methods, DOI: 10.1038/s41592-024-02555-5 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72720&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72720&la=de Wed, 11 Dec 2024 00:00:00 +0000 <![CDATA[Ertürk, A. Deep 3D histology powered by tissue clearing, omics and AI. Nat. Methods 21, 1153-1165 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=71131&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=71131&la=de Mon, 15 Jul 2024 00:00:00 +0000 <![CDATA[Frenz-Wiessner, S.* et al. Generation of complex bone marrow organoids from human induced pluripotent stem cells. Nat. 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