PuSH - HMGU Publikationen https://push-zb.helmholtz-munich.de PuSH - Publikationen-Server des Helmholtz Zentrums München de-de <![CDATA[Bouras, G.* et al. Protein structure-informed bacteriophage genome annotation with Phold. Nucleic Acids Res. 54:gkaf1448 (2026)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76513&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76513&la=de Fri, 27 Feb 2026 00:00:00 +0000 <![CDATA[Gerhalter, M.* et al. A comprehensive view on r-protein binding and rRNA domain structuring during early eukaryotic ribosome formation. Nucleic Acids Res. 54:gkag036 (2026)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76679&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76679&la=de Tue, 10 Mar 2026 00:00:00 +0000 <![CDATA[Trupej, A.* et al. HCR-Proxy resolves site-specific proximal RNA microenvironments at subcompartmental resolution. Nucleic Acids Res. 54:gkag086 (2026)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=77074&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=77074&la=de Tue, 31 Mar 2026 00:00:00 +0000 <![CDATA[Apostolou, Z.* et al. The Tip60 acetylome is a hallmark of the proliferative state in Drosophila. Nucleic Acids Res. 53:gkaf1087 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75982&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75982&la=de Mon, 10 Nov 2025 00:00:00 +0000 <![CDATA[Casper, J.* et al. The UCSC Genome Browser database: 2026 update. Nucleic Acids Res. 54, D1331-D1335 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76063&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76063&la=de Wed, 19 Nov 2025 00:00:00 +0000 <![CDATA[Hipp, C. et al. Molecular mechanisms of biomolecular condensate formation in Drosophila melanogaster siRNA biogenesis. Nucleic Acids Res. 53:gkaf664 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75187&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75187&la=de Tue, 22 Jul 2025 00:00:00 +0000 <![CDATA[Mianesaz, H.* et al. Genomic regions occupied by both RARα and VDR are involved in the convergence and cooperation of retinoid and vitamin D signaling pathways. Nucleic Acids Res. 53:gkaf230 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73918&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73918&la=de Wed, 02 Apr 2025 00:00:00 +0000 <![CDATA[Müller-Hermes, C. et al. Unique conformational dynamics and protein recognition of A-to-I hyper-edited dsRNA. Nucleic Acids Res. 53:gkaf550 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75028&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75028&la=de Fri, 27 Jun 2025 00:00:00 +0000 <![CDATA[Pérez-Ràfols, A.* et al. Deciphering the RNA recognition by Musashi-1 to design protein and RNA variants for in vitro and in vivo applications. Nucleic Acids Res. 53:gkaf741 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75343&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75343&la=de Fri, 10 Oct 2025 00:00:00 +0000 <![CDATA[Schmidt, T. et al. Efficient DNA- and virus-free engineering of cellular transcriptomic states using dCas9 ribonucleoprotein (dRNP) complexes. Nucleic Acids Res. 53:gkaf235 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73804&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73804&la=de Mon, 05 May 2025 00:00:00 +0000 <![CDATA[Steinkamp, R. et al. CORUM in 2024: Protein complexes as drug targets. Nucleic Acids Res. 53, D651-D657 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72306&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72306&la=de Thu, 14 Nov 2024 00:00:00 +0000 <![CDATA[Türei, D.* et al. OmniPath: Integrated knowledgebase for multi-omics analysis. Nucleic Acids Res. 54, D652-D660 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76062&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=76062&la=de Wed, 19 Nov 2025 00:00:00 +0000 <![CDATA[Vilov, S. & Heinig, M. Investigating the performance of foundation models on human 3'UTR sequences. Nucleic Acids Res. 53:gkaf871 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75580&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=75580&la=de Tue, 21 Oct 2025 00:00:00 +0000 <![CDATA[Werner, M. et al. Transcription-replication conflicts drive R-loop-dependent nucleosome eviction and require DOT1L activity for transcription recovery. Nucleic Acids Res. 53:gkaf109 (2025)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73452&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=73452&la=de Mon, 17 Mar 2025 00:00:00 +0000 <![CDATA[Kiss, A.E.* et al. Processivity and specificity of histone acetylation by the male-specific lethal complex. Nucleic Acids Res. 52, 4889-4905 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70025&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70025&la=de Tue, 23 Apr 2024 00:00:00 +0000 <![CDATA[Kuhn, C.K.* et al. The repertoire and structure of adhesion GPCR transcript variants assembled from publicly available deep-sequenced human samples. Nucleic Acids Res. 52, 3823-3836 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70104&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70104&la=de Mon, 29 Apr 2024 00:00:00 +0000 <![CDATA[Luzak, V.* et al. SLAM-seq reveals independent contributions of RNA processing and stability to gene expression in African trypanosomes. Nucleic Acids Res., DOI: 10.1093/nar/gkae1203 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72761&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72761&la=de Tue, 17 Dec 2024 00:00:00 +0000 <![CDATA[Matsuda, A.* et al. Despite the odds: Formation of the SARS-CoV-2 methylation complex. Nucleic Acids Res. 52, 6441-6458 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70235&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70235&la=de Fri, 03 May 2024 00:00:00 +0000 <![CDATA[Niedner, A. et al. Intrinsically disordered RNA-binding motifs cooperate to catalyze RNA folding and drive phase separation. Nucleic Acids Res. 52, 14205-14228 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72418&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72418&la=de Wed, 27 Nov 2024 00:00:00 +0000 <![CDATA[Perez, G.* et al. The UCSC Genome Browser database: 2025 update. Nucleic Acids Res., DOI: 10.1093/nar/gkae974 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72158&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=72158&la=de Wed, 30 Oct 2024 00:00:00 +0000 <![CDATA[Raney, B.J.* et al. The UCSC Genome Browser database: 2024 update. Nucleic Acids Res. 52, D1082-D1088 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=69735&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=69735&la=de Tue, 16 Jan 2024 00:00:00 +0000 <![CDATA[Stadler, M. ; Lukauskas, S. ; Bartke, T. & Müller, C.L. asteRIa enables robust interaction modeling between chromatin modifications and epigenetic readers. Nucleic Acids Res. 52, 6129-6144 (2024)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70683&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=70683&la=de Wed, 12 Jun 2024 00:00:00 +0000 <![CDATA[Akcan, T.S. ; Vilov, S. & Heinig, M. Predictive model of transcriptional elongation control identifies trans regulatory factors from chromatin signatures. Nucleic Acids Res. 51, 1608-1624 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67491&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67491&la=de Thu, 23 Feb 2023 00:00:00 +0000 <![CDATA[Bannister, A.J.* ; Schneider, R. & Varga-Weisz, P.* Editorial: Colyn Crane-Robinson (1935-2023). Nucleic Acids Res. 51, 7709-7713 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68068&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68068&la=de Fri, 06 Oct 2023 00:00:00 +0000 <![CDATA[Bredthauer, C. et al. Transmicron: Accurate prediction of insertion probabilities improves detection of cancer driver genes from transposon mutagenesis screens. Nucleic Acids Res. 51:e21 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67169&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67169&la=de Wed, 11 Jan 2023 00:00:00 +0000 <![CDATA[Chanou, A. et al. Single molecule MATAC-seq reveals key determinants of DNA replication origin efficiency. Nucleic Acids Res. 51, 12303-12324 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68751&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68751&la=de Tue, 28 Nov 2023 00:00:00 +0000 <![CDATA[Keil, P.* et al. Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA. Nucleic Acids Res. 51, 831-851 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67122&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67122&la=de Mon, 09 Jan 2023 00:00:00 +0000 <![CDATA[Molitor, L. et al. Depletion of the RNA-binding protein PURA triggers changes in posttranscriptional gene regulation and loss of P-bodies. Nucleic Acids Res. 51, 1297-1316 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67275&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67275&la=de Tue, 24 Jan 2023 00:00:00 +0000 <![CDATA[Nassar, L.R.* et al. The UCSC genome browser database: 2023 update. Nucleic Acids Res. 51, D1188–D1195 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=66861&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=66861&la=de Fri, 09 Dec 2022 00:00:00 +0000 <![CDATA[Sheikh, A.H.* et al. Linker histone H1 modulates defense priming and immunity in plants. Nucleic Acids Res. 51, 4252-4265 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67519&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67519&la=de Wed, 01 Mar 2023 00:00:00 +0000 <![CDATA[Troisi, R.* et al. Steric hindrance and structural flexibility shape the functional properties of a guanine-rich oligonucleotide. Nucleic Acids Res. 51, 8880-8890 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68060&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68060&la=de Fri, 06 Oct 2023 00:00:00 +0000 <![CDATA[Ugur, E.* et al. Comprehensive chromatin proteomics resolves functional phases of pluripotency and identifies changes in regulatory components. Nucleic Acids Res. 51, 2671-2690 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67455&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67455&la=de Thu, 23 Feb 2023 00:00:00 +0000 <![CDATA[Witzenberger, M. et al. Human TRMT2A methylates tRNA and contributes to translation fidelity. Nucleic Acids Res. 51, 8691-8710 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68295&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68295&la=de Wed, 18 Oct 2023 00:00:00 +0000 <![CDATA[Ambike, S. et al. Targeting genomic SARS-CoV-2 RNA with siRNAs allows efficient inhibition of viral replication and spread. Nucleic Acids Res. 50, 333-349 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63899&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63899&la=de Mon, 31 Jan 2022 00:00:00 +0000 <![CDATA[Bernaudat, F.* et al. Structural basis of DNA methylation-dependent site selectivity of the Epstein-Barr virus lytic switch protein ZEBRA/Zta/BZLF1. Nucleic Acids Res. 50, 490-511 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63778&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63778&la=de Tue, 21 Dec 2021 00:00:00 +0000 <![CDATA[Jones, A. ; Tikhaia, E. ; Mourao, A. & Sattler, M. Structural effects of m6A modification of the Xist A-repeat AUCG tetraloop and its recognition by YTHDC1. Nucleic Acids Res. 50, 2350-2362 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=64364&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=64364&la=de Tue, 26 Apr 2022 00:00:00 +0000 <![CDATA[Shaikh, B.* et al. BioSimulators: A central registry of simulation engines and services for recommending specific tools. Nucleic Acids Res. 50, W108-W114 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=65019&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=65019&la=de Fri, 10 Jun 2022 00:00:00 +0000 <![CDATA[Stolz, P.* et al. TET1 regulates gene expression and repression of endogenous retroviruses independent of DNA demethylation. Nucleic Acids Res. 50, 8491-8511 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=65868&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=65868&la=de Fri, 02 Sep 2022 00:00:00 +0000 <![CDATA[Tsitsiridis, G. et al. CORUM: The comprehensive resource of mammalian protein complexes-2022. Nucleic Acids Res. 51, D539-D545 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=66821&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=66821&la=de Mon, 05 Dec 2022 00:00:00 +0000 <![CDATA[Buschle, A. et al. Epstein-Barr virus inactivates the transcriptome and disrupts the chromatin architecture of its host cell in the first phase of lytic reactivation. Nucleic Acids Res. 49, 3217-3241 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61443&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61443&la=de Tue, 27 Apr 2021 00:00:00 +0000 <![CDATA[Dieckmann, M.A.* et al. EDGAR3.0: Comparative genomics and phylogenomics on a scalable infrastructure. Nucleic Acids Res. 49, W185-W192 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=62024&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=62024&la=de Fri, 18 Jun 2021 00:00:00 +0000 <![CDATA[Manet, E.* et al. Modulation of alternative splicing during early infection of human primary B lymphocytes with Epstein-Barr virus (EBV): A novel function for the viral EBNA-LP protein. Nucleic Acids Res. 49, 10657–10676 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63049&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63049&la=de Mon, 18 Oct 2021 00:00:00 +0000 <![CDATA[Naarmann-de Vries, I.S.* et al. Methylated HNRNPK acts on RPS19 to regulate ALOX15 synthesis in erythropoiesis. Nucleic Acids Res. 49, 3507-3523 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61452&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61452&la=de Tue, 27 Apr 2021 00:00:00 +0000 <![CDATA[Petryk, N.* ; Bultmann, S.* ; Bartke, T. & Defossez, P.-A.* Staying true to yourself: Mechanisms of DNA methylation maintenance in mammals Nucleic Acids Res. 49, 3020–3032 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=60738&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=60738&la=de Thu, 17 Dec 2020 00:00:00 +0000 <![CDATA[Zhao, S.* et al. A ubiquitin switch controls autocatalytic inactivation of the DNA-protein crosslink repair protease SPRTN. Nucleic Acids Res. 49, 902-915 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61249&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61249&la=de Fri, 12 Feb 2021 00:00:00 +0000 <![CDATA[Becker, M. et al. CLUE: A bioinformatic and wet-lab pipeline for multiplexed cloning of custom sgRNA libraries. Nucleic Acids Res. 48:e78 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59254&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59254&la=de Wed, 03 Jun 2020 00:00:00 +0000 <![CDATA[Binas, O.* et al. Structural basis for the recognition of transiently structured AU-rich elements by Roquin. Nucleic Acids Res. 48, 7385-7403 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59272&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59272&la=de Fri, 05 Jun 2020 00:00:00 +0000 <![CDATA[Chlis, N.-K. ; Rausch, L.* ; Brocker, T.* ; Kranich, J.* & Theis, F.J. Predicting single-cell gene expression profiles of imaging flow cytometry data with machine learning. Nucleic Acids Res. 48, 11335-11346 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61223&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=61223&la=de Sat, 06 Feb 2021 00:00:00 +0000 <![CDATA[Escoter Torres, L. ; Greulich, F. ; Quagliarini, F. ; Wierer, M.* & Uhlenhaut, N.H. Anti-inflammatory functions of the glucocorticoid receptor require DNA binding. Nucleic Acids Res. 48, 8393-8407 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59586&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59586&la=de Tue, 07 Jul 2020 00:00:00 +0000 <![CDATA[Jung, S. et al. A ribosomal RNA fragment with 2',3'-cyclic phosphate and GTP-binding activity acts as RIG-I ligand. Nucleic Acids Res. 48, 10397-10412 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63336&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=63336&la=de Mon, 25 Oct 2021 00:00:00 +0000 <![CDATA[Kochanova, N.Y.* et al. A multi-layered structure of the interphase chromocenter revealed by proximity-based biotinylation. Nucleic Acids Res. 48, 4161-4178 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59098&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59098&la=de Thu, 04 Jun 2020 00:00:00 +0000 <![CDATA[Monteagudo-Sánchez, A.* et al. The role of ZFP57 and additional KRAB-zinc finger proteins in the maintenance of human imprinted methylation and multi-locus imprinting disturbances. Nucleic Acids Res. 48, 11394-11407 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=60583&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=60583&la=de Tue, 01 Dec 2020 00:00:00 +0000 <![CDATA[Bressin, A.* et al. TriPepSVM: De novo prediction of RNA-binding proteins based on short amino acid motifs. Nucleic Acids Res. 47, 4406-4417 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55922&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55922&la=de Mon, 13 May 2019 00:00:00 +0000 <![CDATA[Cernilogar, F.M.* et al. Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2. Nucleic Acids Res. 47, 9069-9086 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=56647&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=56647&la=de Wed, 07 Aug 2019 00:00:00 +0000 <![CDATA[Giurgiu, M. et al. CORUM: The comprehensive resource of mammalian protein complexes2019. Nucleic Acids Res. 47, D559-D563 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54591&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54591&la=de Sat, 27 Oct 2018 00:00:00 +0000 <![CDATA[Harpprecht, L.* et al. A Drosophila cell-free system that senses DNA breaks and triggers phosphorylation signalling. Nucleic Acids Res. 47, 7444-7459 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=56878&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=56878&la=de Tue, 24 Sep 2019 00:00:00 +0000 <![CDATA[Kubo, M.* et al. Single-cell transcriptome analysis of Physcomitrella leaf cells during reprogramming using microcapillary manipulation. Nucleic Acids Res. 47, 4539-4553 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=58013&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=58013&la=de Wed, 05 Feb 2020 00:00:00 +0000 <![CDATA[Pabis, M. et al. HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs. Nucleic Acids Res. 47, 1011-1029 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55415&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55415&la=de Sun, 03 Feb 2019 00:00:00 +0000 <![CDATA[Pabis, M. et al. Modulation of HIV-1 gene expression by binding of a ULM motif in the Rev protein to UHM-containing splicing factors. Nucleic Acids Res. 47, 4859-4871 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55715&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55715&la=de Tue, 26 Mar 2019 00:00:00 +0000 <![CDATA[Rohrmoser, M. et al. MIR sequences recruit zinc finger protein ZNF768 to expressed genes. Nucleic Acids Res. 47, 700-715 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54798&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54798&la=de Fri, 07 Dec 2018 00:00:00 +0000 <![CDATA[Tepper, S.* et al. Restriction of AID activity and somatic hypermutation by PARP-1. Nucleic Acids Res. 47, 7418-7429 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=56161&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=56161&la=de Wed, 29 May 2019 00:00:00 +0000 <![CDATA[Angerilli, A.* ; Smialowski, P. & Rupp, R.A.* The Xenopus animal cap transcriptome: Building a mucociliary epithelium. Nucleic Acids Res. 46, 8772-8787 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54509&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54509&la=de Wed, 24 Oct 2018 00:00:00 +0000 <![CDATA[Behrens, G.* et al. A translational silencing function of MCPIP1/Regnase-1 specified by the target site context. Nucleic Acids Res. 46, 4256-4270 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=53806&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=53806&la=de Wed, 11 Jul 2018 00:00:00 +0000 <![CDATA[Fischer, D.S. ; Theis, F.J. & Yosef, N.* Impulse model-based differential expression analysis of time course sequencing data. Nucleic Acids Res. 46:e119 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54788&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54788&la=de Wed, 05 Dec 2018 00:00:00 +0000 <![CDATA[Kriegel, F.* et al. The temperature dependence of the helical twist of DNA. Nucleic Acids Res. 46, 7998-8009 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54016&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54016&la=de Mon, 30 Jul 2018 00:00:00 +0000 <![CDATA[Lloyd, J.P.B.* et al. The loss of SMG1 causes defects in quality control pathways in Physcomitrella patens. Nucleic Acids Res. 46, 5822-5836 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54061&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54061&la=de Fri, 03 Aug 2018 00:00:00 +0000 <![CDATA[Alcaraz, N.* et al. De novo pathway-based biomarker identification. Nucleic Acids Res. 45:e151 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52040&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52040&la=de Fri, 06 Oct 2017 00:00:00 +0000 <![CDATA[Clauß, K.* et al. DNA residence time is a regulatory factor of transcription repression. Nucleic Acids Res. 45, 11121-11130 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52044&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52044&la=de Thu, 12 Oct 2017 00:00:00 +0000 <![CDATA[Deng, T.* et al. Interplay between H1 and HMGN epigenetically regulates OLIG1&2 expression and oligodendrocyte differentiation. Nucleic Acids Res. 45, 3031-3045 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=50068&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=50068&la=de Fri, 23 Dec 2016 00:00:00 +0000 <![CDATA[He, F.* ; Vestergaard, G. ; Peng, W.M.* ; She, Q.* & Peng, X.* CRISPR-Cas type I-A Cascade complex couples viral infection surveillance to host transcriptional regulation in the dependence of Csa3b. Nucleic Acids Res. 45, 1902-1913 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=50812&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=50812&la=de Mon, 19 Jun 2017 00:00:00 +0000 <![CDATA[Kumar, V.* et al. Homeostatic nuclear RAGE-ATM interaction is essential for efficient DNA repair. Nucleic Acids Res. 45, 10595-10613 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52253&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52253&la=de Mon, 13 Nov 2017 00:00:00 +0000 <![CDATA[Lee, H.K. et al. Allele-specific quantitative proteomics unravels molecular mechanisms modulated by cis-regulatory PPARG locus variation. Nucleic Acids Res. 45, 3266-3279 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=50783&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=50783&la=de Tue, 04 Apr 2017 00:00:00 +0000 <![CDATA[Senís, E.* et al. TALEN/CRISPR-mediated engineering of a promoterless anti-viral RNAi hairpin into an endogenous miRNA locus. Nucleic Acids Res. 45:e3 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=49456&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=49456&la=de Tue, 13 Sep 2016 00:00:00 +0000 <![CDATA[Tants, J.-N. et al. Molecular basis for asymmetry sensing of siRNAs by the Drosophila Loqs-PD/Dcr-2 complex in RNA interference. Nucleic Acids Res. 45, 12536-12550 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52158&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=52158&la=de Wed, 25 Oct 2017 00:00:00 +0000 <![CDATA[Zhang, D.* et al. Non-CpG methylation by DNMT3B facilitates REST binding and gene silencing in developing mouse hearts. Nucleic Acids Res. 45, 3102-3115 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=51283&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=51283&la=de Mon, 17 Jul 2017 00:00:00 +0000 <![CDATA[Gunnell, A.* et al. RUNX super-enhancer control through the Notch pathway by Epstein-Barr virus transcription factors regulates B cell growth. Nucleic Acids Res. 44, 4636-4650 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47910&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47910&la=de Wed, 24 Feb 2016 00:00:00 +0000 <![CDATA[Haar, J.* et al. The expression of a viral microRNA is regulated by clustering to allow optimal B cell transformation. Nucleic Acids Res. 44, 1326-1341 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47650&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47650&la=de Thu, 31 Dec 2015 00:00:00 +0000 <![CDATA[Huerta-Cepas, J.* et al. eggNOG 4.5: A hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences. Nucleic Acids Res. 44, D286-D293 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47344&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47344&la=de Tue, 08 Dec 2015 00:00:00 +0000 <![CDATA[Nagarajan, S.* et al. BRD4 promotes p63 and GRHL3 expression downstream of FOXO in mammary epithelial cells. Nucleic Acids Res. 45, 3130-3145 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=51287&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=51287&la=de Mon, 17 Jul 2017 00:00:00 +0000 <![CDATA[Spannagl, M. et al. PGSB PlantsDB: Updates to the database framework for comparative plant genome research. Nucleic Acids Res. 44, D1141-D1147 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47184&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47184&la=de Thu, 05 Nov 2015 00:00:00 +0000 <![CDATA[Anosova, I. et al. A novel RNA binding surface of the TAM domain of TIP5/BAZ2A mediates epigenetic regulation of rRNA genes. Nucleic Acids Res. 43, 5208-5220 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=44553&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=44553&la=de Thu, 30 Apr 2015 00:00:00 +0000 <![CDATA[Cheng, Y. & Perocchi, F. ProtPhylo: Identification of protein-phenotype and protein-protein functional associations via phylogenetic profiling. Nucleic Acids Res. 41, W160-W168 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=44813&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=44813&la=de Mon, 11 May 2015 00:00:00 +0000 <![CDATA[INFRAFRONTIER Consortium (de Castro, A. ; Fessele, S. ; Steinkamp, R. ; Hagn, M. ; Raess, M. ; Hrabě de Angelis, M. ; Meehan, T.F.*) INFRAFRONTIER - providing mutant mouse resources as research tools for the international scientific community. Nucleic Acids Res. 53, D1171-D1175 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=42916&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=42916&la=de Mon, 08 Dec 2014 00:00:00 +0000 <![CDATA[Mannil, D. ; Vogt, I. ; Prinz, J. & Campillos, M. Organ system heterogeneity DB: A database for the visualization of phenotypes at the organ system level. Nucleic Acids Res. 43, D900-D906 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=32554&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=32554&la=de Thu, 16 Oct 2014 00:00:00 +0000 <![CDATA[Mulholland, C.B.* et al. A modular open platform for systematic functional studies under physiological conditions. Nucleic Acids Res. 43:e112 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=44980&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=44980&la=de Thu, 28 May 2015 00:00:00 +0000 <![CDATA[Schraivogel, D.* et al. Importin-β facilitates nuclear import of human GW proteins and balances cytoplasmic gene silencing protein levels. Nucleic Acids Res. 43, 7447-7461 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=46322&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=46322&la=de Thu, 16 Jul 2015 00:00:00 +0000 <![CDATA[Truong, D.J.J. et al. Development of an intein-mediated split-Cas9 system for gene therapy. Nucleic Acids Res. 43, 6450-6458 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=45333&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=45333&la=de Fri, 19 Jun 2015 00:00:00 +0000 <![CDATA[Arnold, R.* ; Goldenberg, F.* ; Mewes, H.-W. & Rattei, T.* SIMAP - the database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage. Nucleic Acids Res. 42, D279-D284 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=30822&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=30822&la=de Mon, 24 Mar 2014 00:00:00 +0000 <![CDATA[Bazot, Q.* et al. Epstein-Barr virus nuclear antigen 3A protein regulates CDKN2B transcription via interaction with MIZ-1. Nucleic Acids Res. 42, 9700-9716 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31879&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31879&la=de Thu, 07 Aug 2014 00:00:00 +0000 <![CDATA[Bleves, S.* et al. HoPaCI-DB: Host-Pseudomonas and Coxiella interaction database. Nucleic Acids Res. 42, D671-D676 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=28104&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=28104&la=de Wed, 06 Nov 2013 00:00:00 +0000 <![CDATA[Blohm, P. et al. Negatome 2.0: A database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis. Nucleic Acids Res. 42, D396-D400 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=28253&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=28253&la=de Fri, 15 Nov 2013 00:00:00 +0000 <![CDATA[Ellwanger, D.C. ; Leonhardt, J. & Mewes, H.-W. Large-scale modeling of condition-specific gene regulatory networks by information integration and inference. Nucleic Acids Res. 42:e166 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=32507&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=32507&la=de Fri, 10 Oct 2014 00:00:00 +0000 <![CDATA[Frankenberger, S. et al. Checkpoint kinase 1 negatively regulates somatic hypermutation. Nucleic Acids Res. 42, 3666-3674 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=29287&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=29287&la=de Tue, 04 Feb 2014 00:00:00 +0000 <![CDATA[Gustems, M. et al. c-Jun/c-Fos heterodimers regulate cellular genes via a newly identified class of methylated DNA sequence motifs. Nucleic Acids Res. 42, 3059-3072 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=29087&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=29087&la=de Mon, 27 Jan 2014 00:00:00 +0000 <![CDATA[Heim, A.* et al. Jumonji domain containing protein 6 (Jmjd6) modulates splicing and specifically interacts with arginine-serine-rich (RS) domains of SR- and SR-like proteins. Nucleic Acids Res. 42, 7833-7850 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31594&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31594&la=de Thu, 12 Jun 2014 00:00:00 +0000 <![CDATA[Ullius, A.* et al. The interaction of MYC with the trithorax protein ASH2L promotes gene transcription by regulating H3K27 modification. Nucleic Acids Res. 42, 6901-6920 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31525&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31525&la=de Mon, 02 Jun 2014 00:00:00 +0000 <![CDATA[Wang, I. et al. Structure, dynamics and RNA binding of the multi-domain splicing factor TIA-1. Nucleic Acids Res. 42, 5949-5966 (2014)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=30941&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=30941&la=de Tue, 01 Apr 2014 00:00:00 +0000 <![CDATA[Chursov, A.* ; Kopetzky, S.J.* ; Bocharov, G.* ; Frishman, D. & Shneider, A.* RNAtips: Analysis of temperature-induced changes of RNA secondary structure. Nucleic Acids Res. 41, W486-W491 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=27322&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=27322&la=de Fri, 20 Sep 2013 00:00:00 +0000 <![CDATA[Chursov, A.* ; Frishman, D. & Shneider, A.* Conservation of mRNA secondary structures may filter out mutations in Escherichia coli evolution. Nucleic Acids Res. 41, 7854-7860 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=27893&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=27893&la=de Thu, 24 Oct 2013 00:00:00 +0000 <![CDATA[de la Vega, L.* ; Hornung, J.* ; Kremmer, E. ; Milanovic, M.* & Schmitz, M.L.* Homeodomain-interacting protein kinase 2-dependent repression of myogenic differentiation is relieved by its caspase-mediated cleavage. Nucleic Acids Res. 41, 5731-5745 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=25739&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=25739&la=de Fri, 12 Jul 2013 00:00:00 +0000 <![CDATA[Garg, D. et al. Translational repression of thymidylate synthase by targeting its mRNA. Nucleic Acids Res. 41, 4159-4170 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=24690&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=24690&la=de Fri, 31 May 2013 00:00:00 +0000 <![CDATA[Gu, B.* ; Eick, D. & Bensaude, O.* CTD serine-2 plays a critical role in splicing and termination factor recruitment to RNA polymerase II in vivo. Nucleic Acids Res. 41, 1591-1603 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=23756&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=23756&la=de Thu, 11 Apr 2013 00:00:00 +0000 <![CDATA[Ivankov, D.N.* et al. QARIP: A web server for quantitative proteomic analysis of regulated intramembrane proteolysis. Nucleic Acids Res. 41, W459-W464 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=27325&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=27325&la=de Fri, 20 Sep 2013 00:00:00 +0000 <![CDATA[Nussbaumer, T. et al. MIPS PlantsDB: A database framework for comparative plant genome research. Nucleic Acids Res. 41, D1144-D1151 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=11721&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=11721&la=de Mon, 31 Dec 2012 00:00:00 +0000 <![CDATA[Sass, S. ; Buettner, F. ; Müller, N.S. & Theis, F.J. A modular framework for gene set analysis integrating multilevel omics data. Nucleic Acids Res. 41, 9622-9633 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=28223&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=28223&la=de Thu, 14 Nov 2013 00:00:00 +0000 <![CDATA[Schneider, K.* et al. Dissection of cell cycle-dependent dynamics of Dnmt1 by FRAP and diffusion-coupled modeling. Nucleic Acids Res. 41, 4860-4876 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=24806&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=24806&la=de Thu, 13 Jun 2013 00:00:00 +0000 <![CDATA[Zhang, Y.-Y. et al. Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition. Nucleic Acids Res. 41, 1343-1354 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22971&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22971&la=de Fri, 01 Mar 2013 00:00:00 +0000 <![CDATA[Arakawa, H. et al. Functional redundancy between DNA ligases I and III in DNA replication in vertebrate cells. Nucleic Acids Res. 40, 2599-2610 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6560&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6560&la=de Sat, 31 Dec 2011 00:00:00 +0000 <![CDATA[Bönisch, C.* et al. H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization. Nucleic Acids Res. 40, 5951-5964 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=8638&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=8638&la=de Thu, 27 Sep 2012 00:00:00 +0000 <![CDATA[Chursov, A.* et al. Sequence-structure relationships in yeast mRNAs. Nucleic Acids Res. 40, 956-962 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=7270&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=7270&la=de Thu, 29 Mar 2012 00:00:00 +0000 <![CDATA[He, Y.* et al. dbDEPC 2.0: Updated database of differentially expressed proteins in human cancers. Nucleic Acids Res. 40, D964-D971 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=7183&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=7183&la=de Tue, 28 Feb 2012 00:00:00 +0000 <![CDATA[Villar-Garea, A.* et al. Developmental regulation of N-terminal H2B methylation in Drosophila melanogaster. Nucleic Acids Res. 40, 1536-1549 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6061&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6061&la=de Thu, 24 Nov 2011 00:00:00 +0000 <![CDATA[Antonov, A.V. BioProfiling.de: Analytical web portal for high-throughput cell biology. Nucleic Acids Res. 39, W323-W327 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6258&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6258&la=de Mon, 21 Nov 2011 00:00:00 +0000 <![CDATA[Felle, M.* et al. The USP7/Dnmt1 complex stimulates the DNA methylation activity of Dnmt1 and regulates the stability of UHRF1. Nucleic Acids Res. 39, 8355-8365 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6235&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6235&la=de Thu, 28 Jul 2011 00:00:00 +0000 <![CDATA[Kantlehner, M.* et al. A high-throughput DNA methylation analysis of a single cell. Nucleic Acids Res. 39, e44:e44 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4215&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4215&la=de Mon, 12 Sep 2011 00:00:00 +0000 <![CDATA[Luo, Q.* ; Pagel, P. ; Vilne, B.* & Frishman, D. DIMA 3.0: Domain Interaction Map. Nucleic Acids Res. 39, 1, D724-D729 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6614&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6614&la=de Tue, 15 Nov 2011 00:00:00 +0000 <![CDATA[Ringwald, M.* et al. The IKMC web portal: A central point of entry to data and resources from the International Knockout Mouse Consortium. Nucleic Acids Res. 39, 1, D849-D855 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2596&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2596&la=de Fri, 15 Apr 2011 00:00:00 +0000 <![CDATA[Wong, P. et al. FGDB: Revisiting the genome annotation of the plant pathogen Fusarium graminearum. Nucleic Acids Res. 39, D637-D639 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4731&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4731&la=de Fri, 31 Dec 2010 00:00:00 +0000 <![CDATA[Antonov, A.V. ; Schmidt, E.E.* ; Dietmann, S. ; Krestyaninova, M.* & Hermjakob, H.* R spider: A network-based analysis of gene lists by combining signaling and metabolic pathways from Reactome and KEGG databases. Nucleic Acids Res. 38, 2, W78-W83 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6137&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6137&la=de Fri, 31 Dec 2010 00:00:00 +0000 <![CDATA[Dietmann, S.* ; Lee, W. ; Wong, P. ; Rodchenkov, I.* & Antonov, A.V. CCancer: A bird's eye view on gene lists reported in cancer-related studies. Nucleic Acids Res. 38, 2, W118-W123 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1799&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1799&la=de Fri, 31 Dec 2010 00:00:00 +0000 <![CDATA[Ertongur, I. ; Tomi, N.S. ; Kutzera, A. ; Fischer-Burkart, S. & Jungnickel, B. Ubc13 dosage is critical for immunoglobulin gene conversion and gene targeting in vertebrate cells. Nucleic Acids Res. 38, 4701-4707 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4992&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4992&la=de Sun, 31 Oct 2010 00:00:00 +0000 <![CDATA[Mewes, H.-W. et al. MIPS: Curated databases and comprehensive secondary data resources in 2010. Nucleic Acids Res. 39, 1, D220-D224 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4181&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4181&la=de Fri, 31 Dec 2010 00:00:00 +0000 <![CDATA[Morgan, H.* et al. EuroPhenome: A repository for high-throughput mouse phenotyping data. Nucleic Acids Res. 38, 1, D577-D585 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=973&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=973&la=de Tue, 16 Mar 2010 00:00:00 +0000 <![CDATA[Rattei, T.* et al. SIMAP - a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters. Nucleic Acids Res. 38, 1, D223-D226 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1422&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1422&la=de Fri, 19 Mar 2010 00:00:00 +0000 <![CDATA[Ruepp, A. et al. CORUM: The comprehensive resource of mammalian protein complexes - 2009. Nucleic Acids Res. 38, 1, D497-D501 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1800&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1800&la=de Fri, 31 Dec 2010 00:00:00 +0000 <![CDATA[Schebelle, L. et al. Efficient conditional and promoter-specific in vivo expression of cDNAs of choice by taking advantage of recombinase-mediated cassette exchange using FlEx gene traps. Nucleic Acids Res. 38, e106-e106:e106 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1622&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1622&la=de Thu, 01 Jul 2010 00:00:00 +0000 <![CDATA[Smialowski, P. et al. The Negatome database: A reference set of non-interacting protein pairs. Nucleic Acids Res. 38, 1, D540-D544 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2417&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2417&la=de Tue, 02 Feb 2010 00:00:00 +0000 <![CDATA[Steininger, S. et al. A novel function for the Mre11-Rad50-Xrs2 complex in base excision repair. Nucleic Acids Res. 38, 1853-1865 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4543&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4543&la=de Fri, 10 Dec 2010 00:00:00 +0000 <![CDATA[Wilkinson, P.* et al. EMMA - mouse mutant resources for the international scientific community. Nucleic Acids Res. 38, D570-D576 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=33&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=33&la=de Mon, 22 Mar 2010 00:00:00 +0000 <![CDATA[Antonov, A.V. ; Dietmann, S. ; Wong, P. ; Lutter, D. & Mewes, H.-W. GeneSet2miRNA: Finding the signature of cooperative miRNA activities in the gene lists. Nucleic Acids Res. 37, Suppl. S, W323-W328 (2009)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=495&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=495&la=de Thu, 03 Sep 2009 00:00:00 +0000 <![CDATA[Hackenberg, M.* ; Sturm, M. ; Langenberger, D.* ; Falcón-Pérez, J.M.* & Aransay, A.M.* miRanalyzer: A microRNA detection and analysis tool for next-generation sequencing experiments. Nucleic Acids Res. 37, (Suppl.1), W68-W76 (2009)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1746&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1746&la=de Fri, 20 Nov 2009 00:00:00 +0000 <![CDATA[Stephan, H.* ; Concannon, C.* ; Kremmer, E. ; Carty, M.P.* & Nasheuer, H.P.* Ionizing radiation-dependent and independent phosphorylation of the 32-kDa subunit of replication protein A during mitosis. Nucleic Acids Res. 37, 6028-6041 (2009)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1973&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1973&la=de Thu, 03 Dec 2009 00:00:00 +0000 <![CDATA[Antonov, A.V. ; Schmidt, T.* ; Wang, Y. & Mewes, H.-W. ProfCom: A web tool for profiling the complex functionality of gene groups identified from high-throughput data. Nucleic Acids Res. 36, W347-W351 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5724&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5724&la=de Thu, 18 Sep 2008 00:00:00 +0000 <![CDATA[Arakawa, H. et al. Protein evolution by hypermutation and selection in the B cell line DT40. Nucleic Acids Res. 36:e1 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2561&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2561&la=de Mon, 21 Jan 2008 00:00:00 +0000 <![CDATA[Barth, S.* et al. Epstein-Barr virus-encoded microRNA miR-BART2 down-regulates the viral DNA polymerase BALF5. Nucleic Acids Res. 36, 666-675 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2514&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2514&la=de Fri, 21 Nov 2008 00:00:00 +0000 <![CDATA[Duszczyk, M.M. ; Zanier, K.* & Sattler, M. A NMR strategy to unambiguously distinguish nucleic acid hairpin and duplex conformations applied to a Xist RNA A-repeat. Nucleic Acids Res. 36, 7068-7077 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2565&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2565&la=de Wed, 31 Dec 2008 00:00:00 +0000 <![CDATA[Greiner, S.* et al. The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. Sequence evaluation and plastome evolution. Nucleic Acids Res. 36, 2366-2378 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1201&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1201&la=de Wed, 17 Sep 2008 00:00:00 +0000 <![CDATA[Izzo, A.* ; Regnard, C.* ; Morales, V.* ; Kremmer, E. & Becker, P.B.* Structure-function analysis of the RNA helicase maleless. Nucleic Acids Res. 36, 950-962 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2171&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2171&la=de Fri, 21 Nov 2008 00:00:00 +0000 <![CDATA[Mewes, H.-W. et al. MIPS: Analysis and annotation of genome information in 2007. Nucleic Acids Res. 36, D196-D201 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5721&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5721&la=de Wed, 17 Sep 2008 00:00:00 +0000 <![CDATA[Mierau, M. et al. Non-conservative homologous recombination in human B lymphocytes is promoted by activation-induced cytidine deaminase and transcription. Nucleic Acids Res. 36, 5591-5601 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2980&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2980&la=de Mon, 08 Dec 2008 00:00:00 +0000 <![CDATA[Pagel, P. et al. DIMA 2.0 - predicted and known domain interactions. Nucleic Acids Res. 36, D651-655 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3195&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3195&la=de Wed, 30 Jul 2008 00:00:00 +0000 <![CDATA[Pich, D. ; Hummer, S. ; Spindler, M.-P. ; Schepers, A. & Hammerschmidt, W. Conditional gene vectors regulated in cis. Nucleic Acids Res. 36:e83 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4894&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4894&la=de Mon, 25 Aug 2008 00:00:00 +0000 <![CDATA[Rattei, T.* et al. SIMAP­-structuring the network of protein similarities. Nucleic Acids Res. 36, D289-D292 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5722&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5722&la=de Wed, 17 Sep 2008 00:00:00 +0000 <![CDATA[Ruepp, A. et al. CORUM: The comprehensive resource of mammalian protein complexes. Nucleic Acids Res. 36, D646-D650 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5719&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5719&la=de Wed, 17 Sep 2008 00:00:00 +0000 <![CDATA[Schnütgen, F.* et al. Enhanced gene trapping in mouse embryonic stem cells. Nucleic Acids Res. 36:e133 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=703&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=703&la=de Wed, 31 Dec 2008 00:00:00 +0000 <![CDATA[Suhre, K. & Schmitt-Kopplin, P. MassTRIX: Mass translator into pathways. Nucleic Acids Res. 36, W481-W484 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5720&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5720&la=de Wed, 17 Sep 2008 00:00:00 +0000 <![CDATA[Tanaka, T.* et al. The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Res. 36, D1028-D1033 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5718&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5718&la=de Wed, 17 Sep 2008 00:00:00 +0000 <![CDATA[Wägele, B. ; Schmidt, T.* ; Mewes, H.-W. & Ruepp, A. OREST: The online resource for EST analysis. Nucleic Acids Res. 36, W140-W144 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5723&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5723&la=de Thu, 18 Sep 2008 00:00:00 +0000 <![CDATA[Walter, M.C. et al. Pedant covers all complete RefSeq genomes. Nucleic Acids Res. 37, D408-D411 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=658&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=658&la=de Wed, 31 Dec 2008 00:00:00 +0000 <![CDATA[Fiegler, H.* et al. High resolution array-CGH analysis of single cells. Nucleic Acids Res. 35:e15 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1980&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1980&la=de Mon, 31 Dec 2007 00:00:00 +0000 <![CDATA[Hitz, C. ; Wurst, W. & Kühn, R. Conditional brain-specific knockdown of MAPK using Cre/loxP regulated RNA interference. Nucleic Acids Res. 35:e90 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1380&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1380&la=de Tue, 04 Dec 2007 00:00:00 +0000 <![CDATA[Hölzel, M. et al. Rapid conditional knock-down–knock-in system for mammalian cells. Nucleic Acids Res. 35:e17 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2520&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2520&la=de Thu, 14 Dec 2006 00:00:00 +0000 <![CDATA[Hölzel, M. et al. The BRCT domain of mammalian Pes1 is crucial for nucleolar localization and rRNA processing. Nucleic Acids Res. 35, 789-800 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3935&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3935&la=de Tue, 10 Jul 2007 00:00:00 +0000 <![CDATA[Messaoudi, L.* et al. Subcellular distribution of human RDM1 protein isoforms and their nucleolar accumulation in response to heat shock and proteotoxic stress. Nucleic Acids Res. 35, 6571-6587 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2215&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2215&la=de Mon, 31 Dec 2007 00:00:00 +0000 <![CDATA[Riley, M.L. et al. PEDANT genome database: 10 years online. Nucleic Acids Res. 35, D354-D357 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5818&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5818&la=de Fri, 21 Sep 2007 00:00:00 +0000 <![CDATA[Spannagl, M. et al. MIPSPlantsDB - plant database resource for integrative and comparative plant genome research. Nucleic Acids Res. 35, 834-840 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5819&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5819&la=de Fri, 21 Sep 2007 00:00:00 +0000 <![CDATA[Antonov, A.V. ; Tetko, I.V. & Mewes, H.-W. A systematic approach to infer biological relevance and biases of gene network structures. Nucleic Acids Res. 34, e6:E6 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4914&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4914&la=de Tue, 07 Nov 2006 00:00:00 +0000 <![CDATA[De-Zolt, S.* et al. High-throughput trapping of secretory pathway genes in mouse embryonic stem cells. Nucleic Acids Res. 34:e25 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4535&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4535&la=de Mon, 24 Jul 2006 00:00:00 +0000 <![CDATA[Grimm, T. et al. Dominant-negative Pes1 mutants inhibit ribosomal RNA processing and cell proliferation via incorporation into the PeBoW-complex. Nucleic Acids Res. 34, 3030-3043 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4931&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4931&la=de Tue, 26 Sep 2006 00:00:00 +0000 <![CDATA[Güldener, U. et al. MPact: The MIPS protein interaction resource on yeast. Nucleic Acids Res. 34, 436-441 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3844&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3844&la=de Thu, 14 Dec 2006 00:00:00 +0000 <![CDATA[Güldener, U. et al. FGDB: A comprehensive fungal genome resource on the plant pathogen Fusarium graminearum. Nucleic Acids Res. 34, D456-D458 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3846&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3846&la=de Thu, 14 Dec 2006 00:00:00 +0000 <![CDATA[Mewes, H.-W. et al. MIPS: Analysis and annotation of proteins from whole genomes in 2005. Nucleic Acids Res. 34, D169-D172 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5346&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5346&la=de Thu, 14 Dec 2006 00:00:00 +0000 <![CDATA[Nord, A.S.* et al. The International Gene Trap Consortium website: A portal to all publicly available gene trap cell lines in mouse. Nucleic Acids Res. 34, D642-D648 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=378&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=378&la=de Thu, 06 Apr 2006 00:00:00 +0000 <![CDATA[Prokisch, H. et al. MitoP2: The mitochondrial proteome database-now including mouse data. Nucleic Acids Res. 34, D705-D711 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1912&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1912&la=de Tue, 04 Apr 2006 00:00:00 +0000 <![CDATA[Rattei, T.* et al. SIMAP: The similarity matrix of proteins. Nucleic Acids Res. 34, 252-256 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4969&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4969&la=de Mon, 18 Dec 2006 00:00:00 +0000 <![CDATA[Ruepp, A. et al. The mouse functional genome database (MfunGD) :Functional annotation of proteins in the light of their cellular context. Nucleic Acids Res. 34, D568–D571 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5483&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5483&la=de Mon, 18 Dec 2006 00:00:00 +0000 <![CDATA[Shimada, N.* et al. Activation of the chicken Ig-ß locus by the collaboration of scattered regulatory regions through changes in chromatin structure. Nucleic Acids Res. 34, 3794-3802 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=893&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=893&la=de Sun, 31 Dec 2006 00:00:00 +0000 <![CDATA[Bornkamm, G.W. et al. Stringent doxycycline-dependent control of gene activities using an episomal one-vector system. Nucleic Acids Res. 33, 1-11:e137 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4644&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4644&la=de Sat, 31 Dec 2005 00:00:00 +0000 <![CDATA[Chen, S.* ; Davies, A.A.* ; Sagan, D. & Ulrich, H.D.* The RING finger ATPase Rad5p of Saccharomyces cerevisiae contributes to DNA double-strand break repair in a ubiquitin-independent manner. Nucleic Acids Res. 33, 5878-5886 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5000&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5000&la=de Sat, 31 Dec 2005 00:00:00 +0000 <![CDATA[Döhr, S. et al. Linking disease-associated genes to regulatory networks via promoter organization. Nucleic Acids Res. 33, 864-872 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4635&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4635&la=de Tue, 15 Feb 2005 00:00:00 +0000 <![CDATA[Güldener, U. et al. CYGD: The Comprehensive Yeast Genome Database. Nucleic Acids Res. 33, SI, D364-368 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2922&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2922&la=de Thu, 01 Dec 2005 00:00:00 +0000 <![CDATA[Kasuga, T.* et al. Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination. Nucleic Acids Res. 33, 6469-6485 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=466&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=466&la=de Sat, 31 Dec 2005 00:00:00 +0000 <![CDATA[Klaften, M. & Hrabě de Angelis, M. ARTS: A web-based tool for the set-up of high-throughput genome-wide mapping panels for the SNP genotyping of mouse mutants. Nucleic Acids Res. 33, 2, W496-W500 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5124&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5124&la=de Tue, 28 Jun 2005 00:00:00 +0000 <![CDATA[Lux, Ch. et al. Transition from initiation to promoter proximal pausing requires the CTD of RNA polymerase II. Nucleic Acids Res. 33, 5139-5144 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3978&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3978&la=de Tue, 13 Dec 2005 00:00:00 +0000 <![CDATA[Maier, H. et al. LitMiner and WikiGene: Identifying problem-related key players of gene regulation using publication abstracts. Nucleic Acids Res. 33, 2, W779-W782 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2327&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2327&la=de Thu, 07 Jul 2005 00:00:00 +0000 <![CDATA[Riley, M.L. ; Schmidt, T.* ; Wagner, C.* ; Mewes, H.-W. & Frishman, D. The PEDANT genome database in 2005. Nucleic Acids Res. 33, D308-D310 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1360&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1360&la=de Thu, 01 Dec 2005 00:00:00 +0000 <![CDATA[Rudd, S.* ; Schoof, H. & Mayer, K.F.X. PlantMarkers - a database of predicted molecular markers from plants. Nucleic Acids Res. 33, 628-632 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4420&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4420&la=de Sat, 31 Dec 2005 00:00:00 +0000 <![CDATA[Rudd, S.* & Tetko, I.V. Éclair - a web service for unravelling species origin of sequences sampled from mixed host interfaces. Nucleic Acids Res. 33, 2, W724-W727 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4848&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4848&la=de Thu, 01 Dec 2005 00:00:00 +0000 <![CDATA[Andreoli, C. et al. MitoP2, an integrated databases on mitochondrial proteins in yeast and man. Nucleic Acids Res. 32, 459-462 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2865&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2865&la=de Mon, 24 May 2004 00:00:00 +0000 <![CDATA[Chapman, R.D. ; Palancade, B.* ; Lang, A. ; Bensaude, O.* & Eick, D. The last CTD repeat of the mammalian RNA polymerase II large subunit is important for its stability. Nucleic Acids Res. 32, 35-44 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2540&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2540&la=de Mon, 09 Feb 2004 00:00:00 +0000 <![CDATA[Mewes, H.-W. et al. MIPS : analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9967&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9967&la=de Fri, 19 Dec 2003 00:00:00 +0000 <![CDATA[Ruepp, A. et al. The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes. Nucleic Acids Res. 32, 5539-5545 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2755&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2755&la=de Fri, 31 Dec 2004 00:00:00 +0000 <![CDATA[Schofield, P.N.* et al. Pathbase: A database of mutant mouse pathology. Nucleic Acids Res. 32, D512-D515 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2697&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2697&la=de Mon, 13 Dec 2004 00:00:00 +0000 <![CDATA[Schoof, H. et al. MIPS Arabidopsis thaliana database (MAtDB) An integrated biological knowledge resource for plant genomics. Nucleic Acids Res. 32, 373-376 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2185&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2185&la=de Mon, 29 Nov 2004 00:00:00 +0000 <![CDATA[Bon, E.* et al. Molecular evolution of eukaryotic genomes: Hemiascomycetous yeast spliceosomal introns. Nucleic Acids Res. 31, 1121-1135 (2003)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22355&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22355&la=de Fri, 10 Oct 2003 00:00:00 +0000 <![CDATA[Drobyshev, A.L. et al. Specificity assessment from fractionation experiments (SAFE) : a novel method to evaluate microarray probe specificity based on hybridisation strinencies. Nucleic Acids Res. 31, 2-10 (2003)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9965&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9965&la=de Wed, 30 Jul 2003 00:00:00 +0000 <![CDATA[Karlowski, W.M. ; Schoof, H. ; Janakiraman, V. ; Stuempflen, V. & Mayer, K.F.X. MOsDB : an integrated information resource for rice genomics. Nucleic Acids Res. 31, 190-192 (2003)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9966&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9966&la=de Fri, 19 Dec 2003 00:00:00 +0000 <![CDATA[Schlosser, I. et al. A role for c-Myc in the regulation of ribosomal RNA processing. Nucleic Acids Res. 31, 6148-6156 (2003)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22386&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22386&la=de Tue, 04 Nov 2003 00:00:00 +0000 <![CDATA[Wolff, H. ; Brack-Werner, R. ; Neumann, M. ; Werner, T. & Schneider, R. Integrated functional and bioinformatics approach for the identification and experimental verification of RNA signals : Application to HIV-1 INS. Nucleic Acids Res. 31, 2839-2851 (2003)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9964&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9964&la=de Wed, 30 Jul 2003 00:00:00 +0000 <![CDATA[Kiechle, M.* ; Manivasakam, P.* ; Eckardt-Schupp, F. ; Schiestl, R.H.* & Friedl, A.A.* Promoter-trapping in Saccharomyces cerevisiae by radiation-assisted fragment insertion. Nucleic Acids Res. 30:e136 (2002)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9968&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9968&la=de Wed, 13 Nov 2002 00:00:00 +0000 <![CDATA[Mewes, H.-W. et al. MIPS: A database for genomes and protein sequences. Nucleic Acids Res. 30, 31-34 (2002)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22361&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22361&la=de Tue, 31 Dec 2002 00:00:00 +0000 <![CDATA[Schoof, H. et al. MIPS Arabidopsis thaliana Database (MAtDB): An integrated biological konwledge resource based on the first complete plant genome. Nucleic Acids Res. 30, 91-93 (2002)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22359&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=22359&la=de Tue, 31 Dec 2002 00:00:00 +0000 <![CDATA[Lengler, J. et al. Antagonistic action of Six3 and Prox1 at the ϒ-crystallin promoter. Nucleic Acids Res. 29, 515-526 (2001)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9962&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9962&la=de Mon, 31 Dec 2001 00:00:00 +0000 <![CDATA[Scharfe, C.* et al. MITOP, the mitochondrial proteome database: 2000 update. Nucleic Acids Res. 28, 155-158 (2000)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=23794&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=23794&la=de Sun, 31 Dec 2000 00:00:00 +0000 <![CDATA[Wittekindt, N.E. ; Hörtnagel, K. & Geltinger, C. Activation of c-myc promoter P1 by immunoglobulin κ gene enhancers in Burkitt lymphoma: functional characterization of the intron enhancer motifs kB, E box 1 and E box 2 and of the 3' enhancer motif PU. Nucleic Acids Res. 28, 800-808 (2000)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9969&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9969&la=de Sun, 31 Dec 2000 00:00:00 +0000 <![CDATA[Immervoll, T. & Wjst, M. Current status of the asthma and allergy database. Nucleic Acids Res. 27, 213-214 (1999)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=20931&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=20931&la=de Fri, 31 Dec 1999 00:00:00 +0000 <![CDATA[Brielmeier, M. et al. Improving stable transfection efficiency : antioxidants dramatically improve the outgrowth of clones under dominant marker selection. Nucleic Acids Res. 26, 2082-2085 (1998)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9963&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=9963&la=de Thu, 31 Dec 1998 00:00:00 +0000 <![CDATA[Frech, K. ; Herrmann, G. & Werner, T. Computer-assisted prediction, classification, and delimitation of protein binding sites in nucleic acids. Nucleic Acids Res. 21, 1655-1664 (1993)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=40327&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=40327&la=de Sun, 11 Apr 1993 00:00:00 +0000 <![CDATA[Möller, E.M. ; Bahnweg, G. ; Sandermann, H. & Geiger, H.H. A Simple and Efficient Protocol for Isolation of High Molecular Weight DNA from Filamentous Fungi, Fruit Bodies, and infected Plant Tissues. Nucleic Acids Res. 20, 6115-6116 (1992)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=20261&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=20261&la=de Thu, 31 Dec 1992 00:00:00 +0000 <![CDATA[Werner, T. A HyperCard-shell for the Human Genome Mapping database (HGM) including a stand-alone reference database. Nucleic Acids Res. 19, 1711 (1991)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=40840&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=40840&la=de Tue, 31 Dec 1991 00:00:00 +0000 <![CDATA[Eick, D. Elongation and Maturation of c-myc RNA is Inhibited by Differentiation Inducing Agents in HL60 Cells. Nucleic Acids Res. 18, 1199-1205 (1990)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=18208&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=18208&la=de Mon, 31 Dec 1990 00:00:00 +0000 <![CDATA[Rump, A. Purification of DNA from agarose by polyethylene glycol induced precipitation. Nucleic Acids Res. (1990)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=18228&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=18228&la=de Mon, 31 Dec 1990 00:00:00 +0000 <![CDATA[Werner, T. A HyperCard-shell for the Human Genome Mapping Database (HGM) Including a Stand-alone Reference Database. Nucleic Acids Res. (1990)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=18380&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=18380&la=de Mon, 31 Dec 1990 00:00:00 +0000 <![CDATA[Brack-Werner, R. ; Werner, T. ; Leib-Mösch, C. ; Hehlmann, R. & Erfle, V.F. Primary structure of the SSAV tether-RNase H endonuclease (pol) region deleted in SSV. Nucleic Acids Res. 17, 5382 (1989)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=42563&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=42563&la=de Sun, 31 Dec 1989 00:00:00 +0000 <![CDATA[Leib-Mösch, C. et al. Two RFLPs associated with the human endogenous retroviral element S71 on chromosome 18q21. Nucleic Acids Res. 17, 2367 (1989)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=41917&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=41917&la=de Sun, 31 Dec 1989 00:00:00 +0000