PuSH - HMGU Publikationen https://push-zb.helmholtz-munich.de PuSH - Publikationen-Server des Helmholtz Zentrums München de-de <![CDATA[Shintani, M.* et al. Integrons, transposons and IS elements promote diversification of multidrug resistance plasmids and adaptation of their hosts to antibiotic pollutants from pharmaceutical companies. Environ. Microbiol. 25, 3035-3051 (2023)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68337&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=68337&la=de Wed, 18 Oct 2023 00:00:00 +0000 <![CDATA[Duffner, C. et al. Genotypic and phenotypic characterization of hydrogenotrophic denitrifiers. Environ. Microbiol. 24, 1887-1901 (2022)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=64255&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=64255&la=de Thu, 23 Jun 2022 00:00:00 +0000 <![CDATA[Ryan, M.J.* et al. Towards a unified data infrastructure to support European and global microbiome research: A call to action. Environ. Microbiol. 23, 372-375 (2021)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=60713&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=60713&la=de Mon, 22 Mar 2021 00:00:00 +0000 <![CDATA[Kundu, K. ; Weber, N. ; Griebler, C. & Elsner, M. Phenotypic heterogeneity as key factor for growth and survival under oligotrophic conditions. Environ. Microbiol. 22, 3339-3356 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59298&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=59298&la=de Tue, 09 Jun 2020 00:00:00 +0000 <![CDATA[Laffite, A.* et al. Biological inhibition of soil nitrification by forest tree species affects Nitrobacter populations. Environ. Microbiol. 22, 1141-1153 (2020)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=57844&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=57844&la=de Mon, 20 Jan 2020 00:00:00 +0000 <![CDATA[Chowdhury, S.P. et al. Effect of long-term organic and mineral fertilization strategies on rhizosphere microbiota assemblage and performance of lettuce. Environ. Microbiol. 21, 2426-2439 (2019)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55860&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=55860&la=de Tue, 23 Apr 2019 00:00:00 +0000 <![CDATA[Fillinger, L. ; Zhou, Y. ; Kellermann, C.S. & Griebler, C. Non-random processes determine the colonization of groundwater sediments by microbial communities in a pristine porous aquifer. Environ. Microbiol. 21, 327-342 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54616&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54616&la=de Fri, 02 Nov 2018 00:00:00 +0000 <![CDATA[Himmelberg, A.M. et al. Anaerobic degradation of phenanthrene by a sulfate-reducing enrichment culture. Environ. Microbiol. 20, 3589-3600 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54019&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=54019&la=de Tue, 31 Jul 2018 00:00:00 +0000 <![CDATA[Marozava, S. et al. Metabolic flexibility of a prospective bioremediator: Desulfitobacterium hafniense Y51 challenged in chemostats. Environ. Microbiol. 20, 2652-2669 (2018)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=53673&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=53673&la=de Fri, 29 Jun 2018 00:00:00 +0000 <![CDATA[Weyrauch, P. et al. Conversion of cis-2-carboxycyclohexylacetyl-CoA in the downstream pathway of anaerobic naphthalene degradation. Environ. Microbiol. 19, 2819-2830 (2017)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=51543&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=51543&la=de Wed, 02 Aug 2017 00:00:00 +0000 <![CDATA[Atashgahi, S.* et al. Geochemical and microbial community determinants of reductive dechlorination at a site biostimulated with glycerol. Environ. Microbiol., DOI: 10.1111/1462-2920.13531 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=49492&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=49492&la=de Tue, 04 Oct 2016 00:00:00 +0000 <![CDATA[Bergkemper, F. et al. Phosphorus depletion in forest soils shapes bacterial communities towards phosphorus recycling systems. Environ. Microbiol. 18, 1988-2000 (2016)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47573&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=47573&la=de Mon, 11 Jan 2016 00:00:00 +0000 <![CDATA[Michielse, C.B.* et al. The global regulator FfSge1 is required for expression of secondary metabolite gene clusters, but not for pathogenicity in Fusarium fujikuroi. Environ. Microbiol. 17, 2690–2708 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31972&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=31972&la=de Mon, 25 Aug 2014 00:00:00 +0000 <![CDATA[Yakimov, M.M.* et al. Microbial community of the deep-sea brine Lake Kryos seawater-brine interface is active below the chaotropicity limit of life as revealed by recovery of mRNA. Environ. Microbiol. 17, 364-382 (2015)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=43227&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=43227&la=de Fri, 06 Feb 2015 00:00:00 +0000 <![CDATA[Eberlein, C.* et al. ATP-dependent/-independent enzymatic ring reductions involved in the anaerobic catabolism of naphthalene. Environ. Microbiol. 15, 1832-1841 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=25747&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=25747&la=de Fri, 12 Jul 2013 00:00:00 +0000 <![CDATA[Hurwitz, B.L.* ; Deng, L. ; Poulos, B.T.* & Sullivan, M.B.* Evaluation of methods to concentrate and purify ocean virus communities through comparative, replicated metagenomics. Environ. Microbiol. 15, 1428-1440 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=10805&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=10805&la=de Tue, 01 Jan 2013 00:00:00 +0000 <![CDATA[Ivankov, D.N.* et al. How many signal peptides are there in bacteria? Environ. Microbiol. 15, 983-990 (2013)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=24323&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=24323&la=de Thu, 09 May 2013 00:00:00 +0000 <![CDATA[Duhaime, M.B.* ; Deng, L. ; Poulos, B.T.* & Sullivan, M.B.* Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: A rigorous assessment and optimization of the linker amplification method. Environ. Microbiol. 14, 2526-2537 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=8621&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=8621&la=de Thu, 27 Sep 2012 00:00:00 +0000 <![CDATA[Kaestli, M.* et al. Out of the ground: Aerial and exotic habitats of the melioidosis bacterium Burkholderia pseudomallei in grasses in Australia. Environ. Microbiol. 14, 2058–2070 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5455&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5455&la=de Sat, 31 Dec 2011 00:00:00 +0000 <![CDATA[Mouttaki, H. ; Johannes, J. & Meckenstock, R.U. Identification of naphthalene carboxylase as a prototype for the anaerobic activation of non-substituted aromatic hydrocarbons. Environ. Microbiol. 14, 2770-2774 (2012)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=10684&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=10684&la=de Tue, 30 Oct 2012 00:00:00 +0000 <![CDATA[Bergmann, F. et al. Genomic insights into the metabolic potential of the polycyclic aromatic hydrocarbon degrading sulfate-reducing Deltaproteobacterium N47. Environ. Microbiol. 13, 1125-1137 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5474&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5474&la=de Thu, 19 May 2011 00:00:00 +0000 <![CDATA[Suárez-Suárez, A.* et al. Response of sulfate-reducing bacteria to an artificial oil-spill in a coastal marine sediment. Environ. Microbiol. 13, 1488-1499 (2011)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6460&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=6460&la=de Thu, 01 Sep 2011 00:00:00 +0000 <![CDATA[Abu Laban, N. ; Selesi, D. ; Rattei, T.* ; Tischler, P.* & Meckenstock, R.U. Identification of enzymes involved in anaerobic benzene degradation by a strictly anaerobic iron-reducing enrichment culture. Environ. Microbiol. 12, 2783-2796 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5685&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5685&la=de Wed, 06 Oct 2010 00:00:00 +0000 <![CDATA[Herrmann, S.* et al. Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing. Environ. Microbiol. 12, 401-411 (2010)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=450&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=450&la=de Mon, 29 Mar 2010 00:00:00 +0000 <![CDATA[Glaubitz, S.* et al. 13C-isotope analyses reveal that chemolithoautotrophic Gamma- and Epsilonproteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea. Environ. Microbiol. 11, 326-337 (2009)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1452&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1452&la=de Thu, 09 Jul 2009 00:00:00 +0000 <![CDATA[Schauss, K. et al. Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils. Environ. Microbiol. 11, 446-456 (2009)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=284&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=284&la=de Thu, 09 Jul 2009 00:00:00 +0000 <![CDATA[Babić, K.H. et al. Influence of different Sinorhizobium meliloti inocula on abundance of genes involved in nitrogen transformations in the rhizosphere of alfalfa (Medicago sativa L.). Environ. Microbiol. 10, 2922-2930 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1377&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1377&la=de Thu, 16 Oct 2008 00:00:00 +0000 <![CDATA[Kunapuli, U. ; Griebler, C. ; Beller, H.R.* & Meckenstock, R.U. Identification of intermediates formed during anaerobic benzene degradation by an iron-reducing enrichment culture. Environ. Microbiol. 10, 1703-1712 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2026&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=2026&la=de Mon, 23 Jun 2008 00:00:00 +0000 <![CDATA[Loy, A.* et al. probeCheck - a central resource for evaluating oligonucleotide probe coverage and specificity. Environ. Microbiol. 10, 2894-2898 (2008)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1963&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=1963&la=de Wed, 31 Dec 2008 00:00:00 +0000 <![CDATA[Gattinger, A. et al. Traditional cattle manure application determines abundance, diversity and activity of methanogenic Archaea in arable European soil. Environ. Microbiol. 9, 612-624 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5597&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=5597&la=de Fri, 30 Mar 2007 00:00:00 +0000 <![CDATA[Meisinger, D.B.* et al. In situ detection of novel Acidobacteria in microbial mats from a chemolithoautotrophically based cave ecosystem (Lower Kane Cave, WY, USA). Environ. Microbiol. 9, 1523-1534 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3154&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3154&la=de Sat, 30 Jun 2007 00:00:00 +0000 <![CDATA[Pages, D.* et al. Exploration of intraclonal adaptation mechanisms of Pseudomonas brassicacearum facing cadmium toxicity. Environ. Microbiol. 9, 2820-2835 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=351&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=351&la=de Mon, 19 Nov 2007 00:00:00 +0000 <![CDATA[Schwarz, J.I.* ; Lüders, T. ; Eckert, W.* & Conrad, R.* Identification of acetate-utilizing Bacteria and Archaea in methanogenic profundal sediments of Lake Kinneret (Israel) by stable isotope probing of rRNA. Environ. Microbiol. 9, 223-237 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4943&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4943&la=de Wed, 24 Jan 2007 00:00:00 +0000 <![CDATA[Winderl, C. ; Schaefer, S. & Lüders, T. Detection of anaerobic toluene and hydrocarbon degraders in contaminated aquifers using benzylsuccinate synthase (bssA) genes as a functional marker. Environ. Microbiol. 9, 1035-1046 (2007)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3440&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3440&la=de Mon, 04 Jun 2007 00:00:00 +0000 <![CDATA[Jahn, M.K.* ; Haderlein, S.B.* & Meckenstock, R.U. Reduction of Prussian Blue by the two iron-reducing microorganisms Geobacter metallireducens and Shewanella alga. Environ. Microbiol. 8, 362-367 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4050&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4050&la=de Thu, 06 Apr 2006 00:00:00 +0000 <![CDATA[Safinowski, M.* & Meckenstock, R.U. Methylation is the initial reaction in anaerobic naphthalene degradation by a sulfate-reducing enrichment culture. Environ. Microbiol. 8, 347-352 (2006)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4255&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4255&la=de Mon, 16 Jan 2006 00:00:00 +0000 <![CDATA[Berg, G.* ; Eberl, L.* & Hartmann, A. The rhizosphere as a reservoir for opportunistic human pathogenic bacteria. Environ. Microbiol. 7, 1673-1685 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3901&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3901&la=de Mon, 21 Nov 2005 00:00:00 +0000 <![CDATA[Bertaux, J.* et al. Occurrence and distribution of endobacteria in the plant-associated mycelium of the ectomycorrhizal fungus Laccaria bicolor S238N. Environ. Microbiol. 7, 1786-1795 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3740&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=3740&la=de Thu, 01 Dec 2005 00:00:00 +0000 <![CDATA[Chan, O.C.* et al. Vertical distribution of structure and function of the methanogenic archael community in Lake Dagow sediment. Environ. Microbiol. 7, 1139-1149 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4805&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4805&la=de Tue, 20 Sep 2005 00:00:00 +0000 <![CDATA[Lu, Y.* ; Lüders, T. ; Friedrich, M.W.* & Conrad, R.* Detecting active methanogenic populations on rice roots using stable isotope probing. Environ. Microbiol. 7, 326-336 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=969&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=969&la=de Mon, 21 Feb 2005 00:00:00 +0000 <![CDATA[Rothballer, M. ; Schmid, M. ; Fekete, A. & Hartmann, A. Comparative in situ analysis of ipdC-gfpmut3 promoter fusions of Azospirillum brasilense strains Sp7 and Sp245. Environ. Microbiol. 7, 1839-1846 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4606&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4606&la=de Wed, 21 Dec 2005 00:00:00 +0000 <![CDATA[Wagner, D.E.* ; Lipski, A.* ; Embacher, A. & Gattinger, A. Methane fluxes in permafrost habitats of the Lena Delta: Effects of microbial community structure and organic matter quality. Environ. Microbiol. 7, 1582-1592 (2005)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4466&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4466&la=de Mon, 11 Jul 2005 00:00:00 +0000 <![CDATA[Rabus, R.* & Rattei, T. The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold arctic sediments. Environ. Microbiol. 6, 887-902 (2004)]]> https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4102&la=de https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=4102&la=de Fri, 31 Dec 2004 00:00:00 +0000