document.write("
"); document.write("
Hipp,\ C.\ ; Mussgnug,\ S.*\ ; Choudhary,\ P.*\ ; Kang,\ H.-S.\ ; Asami,\ S.\ ; Sastre,\ J.*\ ; Donau,\ C.*\ ; Böttcher,\ R.*\ ; Gemmecker,\ G.\ ; Boekhoven,\ J.*\ ; Förstemann,\ K.*\ ; Sattler,\ M.
"); document.write("
Molecular mechanisms of biomolecular condensate formation in \Drosophila melanogaster\ siRNA biogenesis.
"); document.write("
Nucleic Acids Res. 53:gkaf664 (2025)
"); document.write("
"); document.write("
"); document.write("
Mianesaz,\ H.*\ ; Göczi,\ L.*\ ; Nagy,\ G.*\ ; Póliska,\ S.*\ ; Fadel,\ L.\ ; Bojcsuk,\ D.*\ ; Penyige,\ A.*\ ; Szirák,\ K.*\ ; AlHaman,\ F.*\ ; Nagy,\ L.*\ ; Vámosi,\ G.*\ ; Széles,\ L.*
"); document.write("
Genomic regions occupied by both RARα and VDR are involved in the convergence and cooperation of retinoid and vitamin D signaling pathways.
"); document.write("
Nucleic Acids Res. 53:gkaf230 (2025)
"); document.write("
"); document.write("
"); document.write("
Müller-Hermes,\ C.\ ; Piomponi,\ V.*\ ; Hilber,\ S.*\ ; Asami,\ S.*\ ; Kreutz,\ C.*\ ; Bussi,\ G.*\ ; Sattler,\ M.
"); document.write("
Unique conformational dynamics and protein recognition of A-to-I hyper-edited dsRNA.
"); document.write("
Nucleic Acids Res. 53:gkaf550 (2025)
"); document.write("
"); document.write("
"); document.write("
Pérez-Ràfols,\ A.*\ ; Pérez-Ropero,\ G.*\ ; Cerofolini,\ L.*\ ; Sperotto,\ L.\ ; Roca-Martínez,\ J.*\ ; Higuera-Rodriguez,\ R.A.*\ ; Russomanno,\ P.*\ ; Kaiser,\ W.J.*\ ; Vranken,\ W.F.*\ ; Danielson,\ U.H.*\ ; Provenzani,\ A.*\ ; Martelli,\ T.*\ ; Sattler,\ M.\ ; Buijs,\ J.*\ ; Fragai,\ M.*
"); document.write("
Deciphering the RNA recognition by Musashi-1 to design protein and RNA variants for in \vitro\ and in \vivo\ applications.
"); document.write("
Nucleic Acids Res. 53:gkaf741 (2025)
"); document.write("
"); document.write("
"); document.write("
Schmdit,\ T.\ ; Wiesbeck,\ M.\ ; Egert,\ L.\ ; Truong,\ T.-T.\ ; Danese,\ A.*\ ; Voshagen,\ L.*\ ; Imhof,\ S.*\ ; Iraci Borgia,\ M.*\ ; Deeksha\ ; Neuner,\ A.M.\ ; Köferle,\ A.\ ; Geerlof,\ A.\ ; Mourao,\ A.\ ; Stricker,\ S.H.
"); document.write("
Efficient DNA- and virus-free engineering of cellular transcriptomic states using dCas9 ribonucleoprotein (dRNP) complexes.
"); document.write("
Nucleic Acids Res. 53:gkaf235 (2025)
"); document.write("
"); document.write("
"); document.write("
Steinkamp,\ R.\ ; Tsitsiridis,\ G.\ ; Brauner,\ B.\ ; Montrone,\ C.\ ; Fobo,\ G.\ ; Frishman,\ G.\ ; Avram,\ S.*\ ; Oprea,\ T.I.*\ ; Ruepp,\ A.
"); document.write("
CORUM in 2024: Protein complexes as drug targets.
"); document.write("
Nucleic Acids Res. 53, D651-D657 (2025)
"); document.write("
"); document.write("
"); document.write("
Vilov,\ S.\ ; Heinig,\ M.
"); document.write("
Investigating the performance of foundation models on human 3\'UTR sequences.
"); document.write("
Nucleic Acids Res. 53:gkaf871 (2025)
"); document.write("
"); document.write("
"); document.write("
Werner,\ M.\ ; Trauner,\ M.\ ; Schauer,\ T.\ ; Ummethum,\ H.\ ; Márquez-Gómez,\ E.\ ; Lalonde,\ M.\ ; Lee,\ C.S.K.\ ; Tsirkas,\ I.\ ; Sajid,\ A.\ ; Murriello,\ A.C.\ ; Längst,\ G.*\ ; Hamperl,\ S.
"); document.write("
Transcription-replication conflicts drive R-loop-dependent nucleosome eviction and require DOT1L activity for transcription recovery.
"); document.write("
Nucleic Acids Res. 53:gkaf109 (2025)
"); document.write("
"); document.write("
"); document.write("
Kiss,\ A.E.*\ ; Venkatasubramani,\ A.V.*\ ; Pathirana,\ D.*\ ; Krause,\ S.*\ ; Sparr,\ A.C.*\ ; Hasenauer,\ J.\ ; Imhof,\ A.*\ ; Müller,\ M.*\ ; Becker,\ P.B.*
"); document.write("
Processivity and specificity of histone acetylation by the male-specific\ lethal complex.
"); document.write("
Nucleic Acids Res. 52, 4889-4905 (2024)
"); document.write("
"); document.write("
"); document.write("
Kuhn,\ C.K.*\ ; Stenzel,\ U.*\ ; Berndt,\ S.I*\ ; Liebscher,\ I.*\ ; Schöneberg,\ T.*\ ; Horn,\ S.
"); document.write("
The repertoire and structure of adhesion GPCR transcript variants assembled from publicly available deep-sequenced human samples.
"); document.write("
Nucleic Acids Res. 52, 3823-3836 (2024)
"); document.write("
"); document.write("
"); document.write("
Luzak,\ V.*\ ; Osses,\ E.*\ ; Danese,\ A.\ ; Odendaal,\ C.*\ ; Cosentino,\ R.O.*\ ; Stricker,\ S.H.\ ; Haanstra,\ J.R.*\ ; Erhard,\ F.*\ ; Siegel,\ T.N.*
"); document.write("
SLAM-seq reveals independent contributions of RNA processing and stability to gene expression in African trypanosomes.
"); document.write("
Nucleic Acids Res., DOI: 10.1093/nar/gkae1203 (2024)
"); document.write("
"); document.write("
"); document.write("
Matsuda,\ A.*\ ; Plewka,\ J.*\ ; Rawski,\ M.*\ ; Mourao,\ A.\ ; Zajko,\ W.*\ ; Siebenmorgen,\ T.\ ; Kresik,\ L.*\ ; Lis,\ K.*\ ; Jones,\ A.\ ; Pachota,\ M.*\ ; Karim,\ A.*\ ; Hartman,\ K.*\ ; Nirwal,\ S.*\ ; Sonani,\ R.*\ ; Chykunova,\ Y.*\ ; Minia,\ I.*\ ; Mak,\ P.*\ ; Landthaler,\ M.*\ ; Nowotny,\ M.*\ ; Dubin,\ G.*\ ; Sattler,\ M.\ ; Suder,\ P.*\ ; Popowicz,\ G.M.\ ; Pyrc,\ K.*\ ; Czarna,\ A.*
"); document.write("
Despite the odds: Formation of the SARS-CoV-2 methylation complex.
"); document.write("
Nucleic Acids Res. 52, 6441-6458 (2024)
"); document.write("
"); document.write("
"); document.write("
Niedner,\ A.\ ; Monecke,\ T.*\ ; Hennig,\ J.\ ; Klostermann,\ M.*\ ; Hofweber,\ M.*\ ; Davydova,\ E.-O.\ ; Gerber,\ A.P.*\ ; Anosova,\ I.\ ; Mayer,\ W.*\ ; Müller,\ M.\ ; Heym,\ R.G.\ ; Janowski,\ R.\ ; Paillart,\ J.C.*\ ; Dormann,\ D.*\ ; Zarnack,\ K.*\ ; Sattler,\ M.\ ; Niessing,\ D.
"); document.write("
Intrinsically disordered RNA-binding motifs cooperate to catalyze RNA folding and drive phase separation.
"); document.write("
Nucleic Acids Res. 52, 14205-14228 (2024)
"); document.write("
"); document.write("
"); document.write("
Perez,\ G.*\ ; Barber,\ G.P.*\ ; Benet-Pages,\ A.\ ; Casper,\ J.*\ ; Clawson,\ H.*\ ; Diekhans,\ M.*\ ; Fischer,\ C.*\ ; Gonzalez,\ J.N.*\ ; Hinrichs,\ A.S.*\ ; Lee,\ C.M.*\ ; Nassar,\ L.R.*\ ; Raney,\ B.J.*\ ; Speir,\ M.L.*\ ; van Baren,\ M.J.*\ ; Vaske,\ C.J.*\ ; Haussler,\ D.*\ ; Kent,\ W.J.*\ ; Haeussler,\ M.*
"); document.write("
The UCSC Genome Browser database: 2025 update.
"); document.write("
Nucleic Acids Res., DOI: 10.1093/nar/gkae974 (2024)
"); document.write("
"); document.write("
"); document.write("
Raney,\ B.J.*\ ; Barber,\ G.P.*\ ; Benet-Pages,\ A.\ ; Casper,\ J.*\ ; Clawson,\ H.*\ ; Cline,\ M.S.*\ ; Diekhans,\ M.*\ ; Fischer,\ C.*\ ; Navarro Gonzalez,\ J.*\ ; Hickey,\ G.*\ ; Hinrichs,\ A.S.*\ ; Kuhn,\ R.M.*\ ; Lee,\ B.T.*\ ; Lee,\ C.M.*\ ; Le Mercier,\ P.*\ ; Miga,\ K.H.*\ ; Nassar,\ L.R.*\ ; Nejad,\ P.*\ ; Paten,\ B.*\ ; Perez,\ G.*\ ; Schmelter,\ D.*\ ; Speir,\ M.L.*\ ; Wick,\ B.D.*\ ; Zweig,\ A.S.*\ ; Haussler,\ D.*\ ; Kent,\ W.J.*\ ; Haeussler,\ M.*
"); document.write("
The UCSC Genome Browser database: 2024 update.
"); document.write("
Nucleic Acids Res. 52, D1082-D1088 (2024)
"); document.write("
"); document.write("
"); document.write("
Stadler,\ M.\ ; Lukauskas,\ S.\ ; Bartke,\ T.\ ; Müller,\ C.L.
"); document.write("
asteRIa enables robust interaction modeling between chromatin modifications and epigenetic readers.
"); document.write("
Nucleic Acids Res. 52, 6129-6144 (2024)
"); document.write("
"); document.write("
"); document.write("
Akcan,\ T.S.\ ; Vilov,\ S.\ ; Heinig,\ M.
"); document.write("
Predictive model of transcriptional elongation control identifies trans regulatory factors from chromatin signatures.
"); document.write("
Nucleic Acids Res. 51, 1608-1624 (2023)
"); document.write("
"); document.write("
"); document.write("
Bannister,\ A.J.*\ ; Schneider,\ R.\ ; Varga-Weisz,\ P.*
"); document.write("
Editorial: Colyn Crane-Robinson (1935-2023).
"); document.write("
Nucleic Acids Res. 51, 7709-7713 (2023)
"); document.write("
"); document.write("
"); document.write("
Bredthauer,\ C.\ ; Fischer,\ A.*\ ; Ahari,\ A.J.*\ ; Cao,\ X.*\ ; Weber,\ J.*\ ; Rad,\ L.*\ ; Rad,\ R.*\ ; Wachutka,\ L.*\ ; Gagneur,\ J.
"); document.write("
Transmicron: Accurate prediction of insertion probabilities improves detection of cancer driver genes from transposon mutagenesis screens.
"); document.write("
Nucleic Acids Res. 51:e21 (2023)
"); document.write("
"); document.write("
"); document.write("
Chanou,\ A.\ ; Weiß,\ M.\ ; Holler,\ K.\ ; Sajid,\ A.\ ; Straub,\ T.*\ ; Krietsch,\ J.*\ ; Sanchi,\ A.*\ ; Ummethum,\ H.\ ; Lee,\ C.S.K.\ ; Kruse,\ E.\ ; Trauner,\ M.\ ; Werner,\ M.\ ; Lalonde,\ M.\ ; Lopes,\ M.*\ ; Scialdone,\ A.\ ; Hamperl,\ S.
"); document.write("
Single molecule MATAC-seq reveals key determinants of DNA replication origin efficiency.
"); document.write("
Nucleic Acids Res. 51, 12303-12324 (2023)
"); document.write("
"); document.write("
"); document.write("
Keil,\ P.*\ ; Wulf,\ A.*\ ; Kachariya,\ N.\ ; Reuscher,\ S.*\ ; Huhn,\ K.*\ ; Silbern,\ I.*\ ; Altmüller,\ J.*\ ; Keller,\ M.*\ ; Stehle,\ R.\ ; Zarnack,\ K.*\ ; Sattler,\ M.\ ; Urlaub,\ H.*\ ; Sträßer,\ K.*
"); document.write("
Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA.
"); document.write("
Nucleic Acids Res. 51, 831-851 (2023)
"); document.write("
"); document.write("
"); document.write("
Molitor,\ L.\ ; Klostermann,\ M.*\ ; Bacher,\ S.\ ; Merl-Pham,\ J.\ ; Spranger,\ N.\ ; Burczyk,\ S.*\ ; Ketteler,\ C.\ ; Rusha,\ E.\ ; Tews,\ D.*\ ; Pertek,\ A.\ ; Proske,\ M.\ ; Busch,\ A.*\ ; Reschke,\ S.*\ ; Feederle,\ R.\ ; Hauck,\ S.M.\ ; Blum,\ H.*\ ; Drukker,\ M.\ ; Fischer-Posovszky,\ P.*\ ; König,\ J.*\ ; Zarnack,\ K.*\ ; Niessing,\ D.
"); document.write("
Depletion of the RNA-binding protein PURA triggers changes in posttranscriptional gene regulation and loss of P-bodies.
"); document.write("
Nucleic Acids Res. 51, 1297-1316 (2023)
"); document.write("
"); document.write("
"); document.write("
Nassar,\ L.R.*\ ; Barber,\ G.P.*\ ; Benet-Pages,\ A.\ ; Casper,\ J.*\ ; Clawson,\ H.*\ ; Diekhans,\ M.*\ ; Fischer,\ C.*\ ; Gonzalez,\ J.N.*\ ; Hinrichs,\ A.S.*\ ; Lee,\ B.T.*\ ; Lee,\ C.M.*\ ; Muthuraman,\ P.*\ ; Nguy,\ B.*\ ; Pereira,\ T.*\ ; Nejad,\ P.*\ ; Perez,\ G.*\ ; Raney,\ B.J.*\ ; Schmelter,\ D.*\ ; Speir,\ M.L.*\ ; Wick,\ B.D.*\ ; Zweig,\ A.S.*\ ; Haussler,\ D.*\ ; Kuhn,\ R.M.*\ ; Haeussler,\ M.*\ ; Kent,\ W.J.*
"); document.write("
The UCSC genome browser database: 2023 update.
"); document.write("
Nucleic Acids Res. 51, D1188–D1195 (2023)
"); document.write("
"); document.write("
"); document.write("
Sheikh,\ A.H.*\ ; Nawaz,\ K.*\ ; Tabassum,\ N.*\ ; Almeida-Trapp,\ M.*\ ; Mariappan,\ K.G.*\ ; Alhoraibi,\ H.*\ ; Rayapuram,\ N.*\ ; Aranda,\ M.*\ ; Groth,\ M.\ ; Hirt,\ H.*
"); document.write("
Linker histone H1 modulates defense priming and immunity in plants.
"); document.write("
Nucleic Acids Res. 51, 4252-4265 (2023)
"); document.write("
"); document.write("
"); document.write("
Troisi,\ R.*\ ; Napolitano,\ V.\ ; Rossitto,\ E.*\ ; Osman,\ W.*\ ; Nagano,\ M.*\ ; Wakui,\ K.*\ ; Popowicz,\ G.M.\ ; Yoshimoto,\ K.*\ ; Sica,\ F.*
"); document.write("
Steric hindrance and structural flexibility shape the functional properties of a guanine-rich oligonucleotide.
"); document.write("
Nucleic Acids Res. 51, 8880-8890 (2023)
"); document.write("
"); document.write("
"); document.write("
Ugur,\ E.*\ ; De La Porte,\ A.\ ; Qin,\ W.*\ ; Bultmann,\ S.*\ ; Ivanova,\ A.*\ ; Drukker,\ M.\ ; Mann,\ M.*\ ; Wierer,\ M.*\ ; Leonhardt,\ H.*
"); document.write("
Comprehensive chromatin proteomics resolves functional phases of pluripotency and identifies changes in regulatory components.
"); document.write("
Nucleic Acids Res. 51, 2671-2690 (2023)
"); document.write("
"); document.write("
"); document.write("
Witzenberger,\ M.\ ; Burczyk,\ S.*\ ; Settele,\ D.\ ; Mayer,\ W.*\ ; Welp,\ L.M.*\ ; Heiss,\ M.*\ ; Wagner,\ M.*\ ; Monecke,\ T.*\ ; Janowski,\ R.\ ; Carell,\ T.*\ ; Urlaub,\ H.*\ ; Hauck,\ S.M.\ ; Voigt,\ A.*\ ; Niessing,\ D.
"); document.write("
Human TRMT2A methylates tRNA and contributes to translation fidelity.
"); document.write("
Nucleic Acids Res. 51, 8691-8710 (2023)
"); document.write("
"); document.write("
"); document.write("
Ambike,\ S.\ ; Cheng,\ C.-C.\ ; Feuerherd,\ M.\ ; Velkov,\ S.\ ; Baldassi,\ D.*\ ; Afridi,\ S.Q.\ ; Porras-Gonzalez,\ D.L.\ ; Wei,\ X.\ ; Hagen,\ P.\ ; Kneidinger,\ N.*\ ; Stoleriu,\ M.G.*\ ; Grass,\ V.\ ; Burgstaller,\ G.\ ; Pichlmair,\ A.\ ; Merkel,\ O.M.\ ; Ko,\ C.\ ; Michler,\ T.
"); document.write("
Targeting genomic SARS-CoV-2 RNA with siRNAs allows efficient inhibition of viral replication and spread.
"); document.write("
Nucleic Acids Res. 50, 333-349 (2022)
"); document.write("
"); document.write("
"); document.write("
Bernaudat,\ F.*\ ; Gustems,\ M.\ ; Günther,\ J.\ ; Oliva,\ M.F.*\ ; Buschle,\ A.\ ; Göbel,C.\ ; Pagniez,\ P.*\ ; Lupo,\ J.*\ ; Signor,\ L.*\ ; Müller,\ C.W.*\ ; Morand,\ P.*\ ; Sattler,\ M.\ ; Hammerschmidt,\ W.\ ; Petosa,\ C.*
"); document.write("
Structural basis of DNA methylation-dependent site selectivity of the Epstein-Barr virus lytic switch protein ZEBRA/Zta/BZLF1.
"); document.write("
Nucleic Acids Res. 50, 490-511 (2022)
"); document.write("
"); document.write("
"); document.write("
Jones,\ A.\ ; Tikhaia,\ E.\ ; Mourao,\ A.\ ; Sattler,\ M.
"); document.write("
Structural effects of m6A modification of the Xist A-repeat AUCG tetraloop and its recognition by YTHDC1.
"); document.write("
Nucleic Acids Res. 50, 2350-2362 (2022)
"); document.write("
"); document.write("
"); document.write("
Shaikh,\ B.*\ ; Smith,\ L.P.*\ ; Vasilescu,\ D.*\ ; Marupilla,\ G.*\ ; Wilson,\ M.*\ ; Agmon,\ E.*\ ; Agnew,\ H.*\ ; Andrews,\ S.S.*\ ; Anwar,\ A.*\ ; Beber,\ M.E.*\ ; Bergmann,\ F.T.*\ ; Brooks,\ D.*\ ; Brusch,\ L.*\ ; Calzone,\ L.*\ ; Choi,\ K.*\ ; Cooper,\ J.*\ ; Detloff,\ J.*\ ; Drawert,\ B.*\ ; Dumontier,\ M.*\ ; Ermentrout,\ G.B.*\ ; Faeder,\ J.R.*\ ; Freiburger,\ A.P.*\ ; Fröhlich,\ F.*\ ; Funahashi,\ A.*\ ; Garny,\ A.*\ ; Gennari,\ J.H.*\ ; Gleeson,\ P.*\ ; Goelzer,\ A.*\ ; Haiman,\ Z.*\ ; Hasenauer,\ J.*\ ; Hellerstein,\ J.L.*\ ; Hermjakob,\ H.*\ ; Hoops,\ S.*\ ; Ison,\ J.C.*\ ; Jahn,\ D.*\ ; Jakubowski,\ H.V.*\ ; Jordan,\ R.*\ ; Kalaš,\ M.*\ ; König,\ M.*\ ; Liebermeister,\ W.*\ ; Sheriff,\ R.S.M.*\ ; Mandal,\ S.*\ ; McDougal,\ R.*\ ; Medley,\ J.K.*\ ; Mendes,\ P.*\ ; Müller,\ R.*\ ; Myers,\ C.J.*\ ; Naldi,\ A.*\ ; Nguyen,\ T.V.N.*\ ; Nickerson,\ D.P.*\ ; Olivier,\ B.G.*\ ; Patoliya,\ D.*\ ; Paulevé,\ L.*\ ; Petzold,\ L.R.*\ ; Priya,\ A.*\ ; Rampadarath,\ A.K.*\ ; Rohwer,\ J.M.*\ ; Saglam,\ A.S.*\ ; Singh,\ D.*\ ; Sinha,\ A.*\ ; Snoep,\ J.D.*\ ; Sorby,\ H.*\ ; Spangler,\ R.*\ ; Starruß,\ J.*\ ; Thomas,\ P.J.*\ ; van Niekerk,\ D.*\ ; Weindl,\ D.\ ; Zhang,\ F.*\ ; Zhukova,\ A.*\ ; Goldberg,\ A.P.*\ ; Schaff,\ J.C.*\ ; Blinov,\ M.L.*\ ; Sauro,\ H.M.*\ ; Moraru,\ I.I.*\ ; Karr,\ J.R.*
"); document.write("
BioSimulators: A central registry of simulation engines and services for recommending specific tools.
"); document.write("
Nucleic Acids Res. 50, W108-W114 (2022)
"); document.write("
"); document.write("
"); document.write("
Stolz,\ P.*\ ; Mantero,\ A.S.*\ ; Tvardovskiy,\ A.\ ; Ugur,\ E.*\ ; Wange,\ L.E.*\ ; Mulholland,\ C.B.*\ ; Cheng,\ Y.*\ ; Wierer,\ M.*\ ; Enard,\ W.*\ ; Schneider,\ R.\ ; Bartke,\ T.\ ; Leonhardt,\ H.*\ ; Elsässer,\ S.J.*\ ; Bultmann,\ S.*
"); document.write("
TET1 regulates gene expression and repression of endogenous retroviruses independent of DNA demethylation.
"); document.write("
Nucleic Acids Res. 50, 8491-8511 (2022)
"); document.write("
"); document.write("
"); document.write("
Tsitsiridis,\ G.\ ; Steinkamp,\ R.\ ; Giurgiu,\ M.*\ ; Brauner,\ B.\ ; Fobo,\ G.\ ; Frishman,\ G.\ ; Montrone,\ C.\ ; Ruepp,\ A.
"); document.write("
CORUM: The comprehensive resource of mammalian protein complexes-2022.
"); document.write("
Nucleic Acids Res. 51, D539-D545 (2022)
"); document.write("
"); document.write("
"); document.write("
Buschle,\ A.\ ; Mrozek-Gorska,\ P.\ ; Cernilogar,\ F.M.*\ ; Ettinger,\ A.\ ; Pich,\ D.\ ; Krebs,\ S.*\ ; Mocanu,\ B.\ ; Blum,\ H.*\ ; Schotta,\ G.*\ ; Straub,\ T.*\ ; Hammerschmidt,\ W.
"); document.write("
Epstein-Barr virus inactivates the transcriptome and disrupts the chromatin architecture of its host cell in the first phase of lytic reactivation.
"); document.write("
Nucleic Acids Res. 49, 3217-3241 (2021)
"); document.write("
"); document.write("
"); document.write("
Dieckmann,\ M.A.*\ ; Beyvers,\ S.*\ ; Nkouamedjo-Fankep,\ R.C.*\ ; Hanel,\ P.\ ; Jelonek,\ L.*\ ; Blom,\ J.*\ ; Goesmann,\ A.*
"); document.write("
EDGAR3.0: Comparative genomics and phylogenomics on a scalable infrastructure.
"); document.write("
Nucleic Acids Res. 49, W185-W192 (2021)
"); document.write("
"); document.write("
"); document.write("
Manet,\ E.*\ ; Polvèche,\ H.*\ ; Mure,\ F.*\ ; Mrozek-Gorska,\ P.\ ; Roisné-Hamelin,\ F.*\ ; Hammerschmidt,\ W.\ ; Auboeuf,\ D.*\ ; Gruffat,\ H.*
"); document.write("
Modulation of alternative splicing during early infection of human primary B lymphocytes with Epstein-Barr virus (EBV): A novel function for the viral EBNA-LP protein.
"); document.write("
Nucleic Acids Res. 49, 10657–10676 (2021)
"); document.write("
"); document.write("
"); document.write("
Naarmann-de Vries,\ I.S.*\ ; Senatore,\ R.*\ ; Moritz,\ B.*\ ; Marx,\ G.*\ ; Urlaub,\ H.*\ ; Niessing,\ D.\ ; Ostareck,\ D.H.*\ ; Ostareck-Lederer,\ A.*
"); document.write("
Methylated HNRNPK acts on RPS19 to regulate ALOX15 synthesis in erythropoiesis.
"); document.write("
Nucleic Acids Res. 49, 3507-3523 (2021)
"); document.write("
"); document.write("
"); document.write("
Petryk,\ N.*\ ; Bultmann,\ S.*\ ; Bartke,\ T.\ ; Defossez,\ P.-A.*
"); document.write("
Staying true to yourself: Mechanisms of DNA methylation maintenance in mammals
"); document.write("
Nucleic Acids Res. 49, 3020–3032 (2021)
"); document.write("
"); document.write("
"); document.write("
Zhao,\ S.*\ ; Kieser,\ A.*\ ; Li,\ H.Y.*\ ; Reinking,\ H.K.*\ ; Weickert,\ P.*\ ; Euteneuer,\ S.*\ ; Yaneva,\ D.*\ ; Acampora,\ A.C.*\ ; Götz,\ M.J.*\ ; Feederle,\ R.\ ; Stingele,\ J.*
"); document.write("
A ubiquitin switch controls autocatalytic inactivation of the DNA-protein crosslink repair protease SPRTN.
"); document.write("
Nucleic Acids Res. 49, 902-915 (2021)
"); document.write("
"); document.write("
"); document.write("
Becker,\ M.\ ; Noll-Puchta,\ H.*\ ; Amend,\ D.\ ; Nolte,\ F.*\ ; Fuchs,\ C.\ ; Jeremias,\ I.\ ; Braun,\ C.J.*
"); document.write("
CLUE: A bioinformatic and wet-lab pipeline for multiplexed cloning of custom sgRNA libraries.
"); document.write("
Nucleic Acids Res. 48:e78 (2020)
"); document.write("
"); document.write("
"); document.write("
Binas,\ O.*\ ; Tants,\ J.N.*\ ; Peter,\ S.A.*\ ; Janowski,\ R.\ ; Davydova,\ E.-O.\ ; Braun,\ J.*\ ; Niessing,\ D.\ ; Schwalbe,\ H.*\ ; Weigand,\ J.E.*\ ; Schlundt,\ A.*
"); document.write("
Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
"); document.write("
Nucleic Acids Res. 48, 7385-7403 (2020)
"); document.write("
"); document.write("
"); document.write("
Chlis,\ N.-K.\ ; Rausch,\ L.*\ ; Brocker,\ T.*\ ; Kranich,\ J.*\ ; Theis,\ F.J.
"); document.write("
Predicting single-cell gene expression profiles of imaging flow cytometry data with machine learning.
"); document.write("
Nucleic Acids Res. 48, 11335-11346 (2020)
"); document.write("
"); document.write("
"); document.write("
Escoter Torres,\ L.\ ; Greulich,\ F.\ ; Quagliarini,\ F.\ ; Wierer,\ M.*\ ; Uhlenhaut,\ N.H.
"); document.write("
Anti-inflammatory functions of the glucocorticoid receptor require DNA binding.
"); document.write("
Nucleic Acids Res. 48, 8393-8407 (2020)
"); document.write("
"); document.write("
"); document.write("
Jung,\ S.\ ; von Thülen,\ T.*\ ; Yang,\ I.*\ ; Laukemper,\ V.*\ ; Rupf,\ B.*\ ; Janga,\ H.*\ ; Panagiotidis,\ G.-D.*\ ; Schoen,\ A.*\ ; Nicolai,\ M.*\ ; Schulte,\ L.N.*\ ; Obermann,\ H.-L.*\ ; Weber,\ F.*\ ; Kaufmann,\ A.*\ ; Bauer,\ S.*
"); document.write("
A ribosomal RNA fragment with 2\',3\'-cyclic phosphate and GTP-binding activity acts as RIG-I ligand.
"); document.write("
Nucleic Acids Res. 48, 10397-10412 (2020)
"); document.write("
"); document.write("
"); document.write("
Kochanova,\ N.Y.*\ ; Schauer,\ T.*\ ; Mathias,\ G.P.*\ ; Lukacs,\ A.*\ ; Schmidt,\ A.*\ ; Flatley,\ A.\ ; Schepers,\ A.\ ; Thomae,\ A.W.*\ ; Imhof,\ A.*
"); document.write("
A multi-layered structure of the interphase chromocenter revealed by proximity-based biotinylation.
"); document.write("
Nucleic Acids Res. 48, 4161-4178 (2020)
"); document.write("
"); document.write("
"); document.write("
Monteagudo-Sánchez,\ A.*\ ; Hernandez Mora,\ J.R.*\ ; Simon,\ C.*\ ; Burton,\ A.\ ; Tenorio,\ J.*\ ; Lapunzina,\ P.*\ ; Clark,\ S.*\ ; Esteller,\ M.*\ ; Kelsey,\ G.*\ ; López-Siguero,\ J.P.*\ ; de Nanclares,\ G.P.*\ ; Torres-Padilla,\ M.E.\ ; Monk,\ D.*
"); document.write("
The role of ZFP57 and additional KRAB-zinc finger proteins in the maintenance of human imprinted methylation and multi-locus imprinting disturbances.
"); document.write("
Nucleic Acids Res. 48, 11394-11407 (2020)
"); document.write("
"); document.write("
"); document.write("
Bressin,\ A.*\ ; Schulte-Sasse,\ R.*\ ; Figini,\ D.*\ ; Urdaneta,\ E.C.*\ ; Beckmann,\ B.M.*\ ; Marsico,\ A.
"); document.write("
TriPepSVM: De novo prediction of RNA-binding proteins based on short amino acid motifs.
"); document.write("
Nucleic Acids Res. 47, 4406-4417 (2019)
"); document.write("
"); document.write("
"); document.write("
Cernilogar,\ F.M.*\ ; Hasenöder\ ; Wang,\ Z.*\ ; Scheibner,\ K.\ ; Burtscher,\ I.\ ; Sterr,\ M.\ ; Smialowski,\ P.\ ; Groh,\ S.*\ ; Evenroed,\ I.M.*\ ; Gilfillan,\ G.D.*\ ; Lickert,\ H.\ ; Schotta,\ G.*
"); document.write("
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2.
"); document.write("
Nucleic Acids Res. 47, 9069-9086 (2019)
"); document.write("
"); document.write("
"); document.write("
Giurgiu,\ M.\ ; Reinhard,\ J.\ ; Brauner,\ B.\ ; Dunger-Kaltenbach,\ I.\ ; Fobo,\ G.\ ; Frishman,\ D.\ ; Montrone,\ C.\ ; Ruepp,\ A.
"); document.write("
CORUM: The comprehensive resource of mammalian protein complexes2019.
"); document.write("
Nucleic Acids Res. 47, D559-D563 (2019)
"); document.write("
"); document.write("
"); document.write("
Harpprecht,\ L.*\ ; Baldi,\ S.*\ ; Schauer,\ T.*\ ; Schmidt,\ A.*\ ; Bange,\ T.*\ ; Robles,\ M.S.*\ ; Kremmer,\ E.\ ; Imhof,\ A.*\ ; Becker,\ P.B.*
"); document.write("
A \Drosophila\ cell-free system that senses DNA breaks and triggers phosphorylation signalling.
"); document.write("
Nucleic Acids Res. 47, 7444-7459 (2019)
"); document.write("
"); document.write("
"); document.write("
Kubo,\ M.*\ ; Nishiyama,\ T.*\ ; Tamada,\ Y.*\ ; Sano,\ R.*\ ; Ishikawa,\ M.*\ ; Murata,\ T.*\ ; Imai,\ A.*\ ; Lang,\ D.
"); document.write("
Single-cell transcriptome analysis of Physcomitrella leaf cells during reprogramming using microcapillary manipulation.
"); document.write("
Nucleic Acids Res. 47, 4539-4553 (2019)
"); document.write("
"); document.write("
"); document.write("
Pabis,\ M.\ ; Popowicz,\ G.M.\ ; Stehle,\ R.\ ; Fernández-Ramos,\ D.*\ ; Asami,\ S.\ ; Warner,\ L.\ ; García-Mauriño,\ S.M.*\ ; Schlundt,\ A.\ ; Martínez-Chantar,\ M.L.*\ ; Díaz-Moreno,\ I.*\ ; Sattler,\ M.
"); document.write("
HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs.
"); document.write("
Nucleic Acids Res. 47, 1011-1029 (2019)
"); document.write("
"); document.write("
"); document.write("
Pabis,\ M.\ ; Corsini,\ L.\ ; Vincendeau,\ M.\ ; Tripsianes,\ K.*\ ; Gibson,\ T.J.*\ ; Brack-Werner,\ R.\ ; Sattler,\ M.
"); document.write("
Modulation of HIV-1 gene expression by binding of a ULM motif in the Rev protein to UHM-containing splicing factors.
"); document.write("
Nucleic Acids Res. 47, 4859-4871 (2019)
"); document.write("
"); document.write("
"); document.write("
Rohrmoser,\ M.\ ; Kluge,\ M.*\ ; Yahia,\ Y.*\ ; Gruber-Eber,\ A.\ ; Maqbool,\ M.A.*\ ; Forné,\ I.*\ ; Krebs,\ S.*\ ; Blum,\ H.*\ ; Greifenberg,\ A.K.*\ ; Geyer,\ M.*\ ; Descostes,\ N.*\ ; Imhof,\ A.*\ ; Andrau,\ J.C.*\ ; Friedel,\ C.C.*\ ; Eick,\ D.
"); document.write("
MIR sequences recruit zinc finger protein ZNF768 to expressed genes.
"); document.write("
Nucleic Acids Res. 47, 700-715 (2019)
"); document.write("
"); document.write("
"); document.write("
Tepper,\ S.*\ ; Mortusewicz,\ O.*\ ; Członka,\ E.*\ ; Bello,\ A.*\ ; Schmidt,\ A.*\ ; Jeschke,\ J.*\ ; Fischbach,\ A.*\ ; Pfeil,\ I.\ ; Petersen-Mahrt,\ S.K.*\ ; Mangerich,\ A.*\ ; Helleday,\ T.*\ ; Leonhardt,\ H.*\ ; Jungnickel,\ B.*
"); document.write("
Restriction of AID activity and somatic hypermutation by PARP-1.
"); document.write("
Nucleic Acids Res. 47, 7418-7429 (2019)
"); document.write("
"); document.write("
"); document.write("
Angerilli,\ A.*\ ; Smialowski,\ P.\ ; Rupp,\ R.A.*
"); document.write("
The Xenopus animal cap transcriptome: Building a mucociliary epithelium.
"); document.write("
Nucleic Acids Res. 46, 8772-8787 (2018)
"); document.write("
"); document.write("
"); document.write("
Behrens,\ G.*\ ; Winzen,\ R.*\ ; Rehage,\ N.*\ ; Doerrie,\ A.*\ ; Barsch,\ M.*\ ; Hoffmann,\ A.L.*\ ; Hackermueller,\ J.*\ ; Tiedje,\ C.*\ ; Heissmeyer,\ V.\ ; Holtmann,\ H.*
"); document.write("
A translational silencing function of MCPIP1/Regnase-1 specified by the target site context.
"); document.write("
Nucleic Acids Res. 46, 4256-4270 (2018)
"); document.write("
"); document.write("
"); document.write("
Fischer,\ D.S.\ ; Theis,\ F.J.\ ; Yosef,\ N.*
"); document.write("
Impulse model-based differential expression analysis of time course sequencing data.
"); document.write("
Nucleic Acids Res. 46:e119 (2018)
"); document.write("
"); document.write("
"); document.write("
Kriegel,\ F.*\ ; Matek,\ C.\ ; Dršata,\ T.*\ ; Kulenkampff,\ K.*\ ; Tschirpke,\ S.*\ ; Zacharias,\ M.*\ ; Lankaš,\ F.*\ ; Lipfert,\ J.*
"); document.write("
The temperature dependence of the helical twist of DNA.
"); document.write("
Nucleic Acids Res. 46, 7998-8009 (2018)
"); document.write("
"); document.write("
"); document.write("
Lloyd,\ J.P.B.*\ ; Lang,\ D.\ ; Zimmer,\ A.D.*\ ; Causier,\ B.*\ ; Reski,\ R.*\ ; Davies,\ B.*
"); document.write("
The loss of SMG1 causes defects in quality control pathways in \Physcomitrella patens\.
"); document.write("
Nucleic Acids Res. 46, 5822-5836 (2018)
"); document.write("
"); document.write("
"); document.write("
Alcaraz,\ N.*\ ; List,\ M.*\ ; Batra,\ R.\ ; Vandin,\ F.*\ ; Ditzel,\ H.J.*\ ; Baumbach,\ J.*
"); document.write("
\De novo\ pathway-based biomarker identification.
"); document.write("
Nucleic Acids Res. 45:e151 (2017)
"); document.write("
"); document.write("
"); document.write("
Clauß,\ K.*\ ; Popp,\ A.P.*\ ; Schulze,\ L.*\ ; Hettich,\ J.*\ ; Reisser,\ M.*\ ; Escoter Torres,\ L.\ ; Uhlenhaut,\ N.H.\ ; Gebhardt,\ J.C.M.*
"); document.write("
DNA residence time is a regulatory factor of transcription repression.
"); document.write("
Nucleic Acids Res. 45, 11121-11130 (2017)
"); document.write("
"); document.write("
"); document.write("
Deng,\ T.*\ ; Postnikov,\ Y.*\ ; Zhang,\ S.*\ ; Garrett,\ L.\ ; Becker,\ L.\ ; Rácz,\ I.\ ; Hölter,\ S.M.\ ; Wurst,\ W.\ ; Fuchs,\ H.\ ; Gailus-Durner,\ V.\ ; Hrabě de Angelis,\ M.\ ; Bustin,\ M.*
"); document.write("
Interplay between H1 and HMGN epigenetically regulates OLIG1\&2 expression and oligodendrocyte differentiation.
"); document.write("
Nucleic Acids Res. 45, 3031-3045 (2017)
"); document.write("
"); document.write("
"); document.write("
He,\ F.*\ ; Vestergaard,\ G.\ ; Peng,\ W.M.*\ ; She,\ Q.*\ ; Peng,\ X.*
"); document.write("
CRISPR-Cas type I-A Cascade complex couples viral infection surveillance to host transcriptional regulation in the dependence of Csa3b.
"); document.write("
Nucleic Acids Res. 45, 1902-1913 (2017)
"); document.write("
"); document.write("
"); document.write("
Kumar,\ V.*\ ; Fleming,\ T.*\ ; Terjung,\ S.*\ ; Gorzelanny,\ C.*\ ; Gebhardt,\ C.*\ ; Agrawal,\ R.*\ ; Mall,\ M.A.*\ ; Ranzinger,\ J.*\ ; Zeier,\ M.*\ ; Madhusudhan,\ T.*\ ; Ranjan,\ S.*\ ; Isermann,\ B.*\ ; Liesz,\ A.*\ ; Deshpande,\ D.*\ ; Häring,\ H.-U.\ ; Biswas,\ S.K.*\ ; Reynolds,\ P.R.*\ ; Hammes,\ H.P.*\ ; Peperkok,\ R.*\ ; Angel,\ P.*\ ; Herzig,\ S.\ ; Nawroth,\ P.P.
"); document.write("
Homeostatic nuclear RAGE-ATM interaction is essential for efficient DNA repair.
"); document.write("
Nucleic Acids Res. 45, 10595-10613 (2017)
"); document.write("
"); document.write("
"); document.write("
Lee,\ H.K.\ ; Qian,\ K.\ ; von Toerne,\ C.\ ; Hoerburger,\ L.*\ ; Claussnitzer,\ M.\ ; Hoffmann,\ C.*\ ; Glunk,\ V.\ ; Wahl,\ S.\ ; Breier,\ M.\ ; Eck,\ F.*\ ; Jafari,\ L.*\ ; Molnos,\ S.\ ; Grallert,\ H.\ ; Dahlman,\ I.*\ ; Arner,\ P.*\ ; Brunner,\ C.*\ ; Hauner,\ H.\ ; Hauck,\ S.M.\ ; Laumen,\ H.
"); document.write("
Allele-specific quantitative proteomics unravels molecular mechanisms modulated by\ cis\-regulatory \PPARG\ locus variation.
"); document.write("
Nucleic Acids Res. 45, 3266-3279 (2017)
"); document.write("
"); document.write("
"); document.write("
Senís,\ E.*\ ; Mockenhaupt,\ S.*\ ; Rupp,\ D.*\ ; Bauer,\ T.*\ ; Paramasivam,\ N.*\ ; Knapp,\ B.\ ; Gronych,\ J.*\ ; Grosse,\ S.D.*\ ; Windisch,\ M.P.*\ ; Schmidt,\ F.*\ ; Theis,\ F.J.\ ; Eils,\ R.*\ ; Lichter,\ P.*\ ; Schlesner,\ M.*\ ; Bartenschlager,\ R.*\ ; Grimm,\ D.*
"); document.write("
TALEN/CRISPR-mediated engineering of a promoterless anti-viral RNAi hairpin into an endogenous miRNA locus.
"); document.write("
Nucleic Acids Res. 45:e3 (2017)
"); document.write("
"); document.write("
"); document.write("
Tants,\ J.-N.\ ; Fesser,\ S.*\ ; Kern,\ T.\ ; Stehle,\ R.\ ; Geerlof,\ A.\ ; Wunderlich,\ C.*\ ; Juen,\ M.*\ ; Hartlmüller,\ C.\ ; Böttcher,\ R.*\ ; Kunzelmann,\ S.*\ ; Lange,\ O.L.*\ ; Kreutz,\ C.*\ ; Förstemann,\ K.*\ ; Sattler,\ M.
"); document.write("
Molecular basis for asymmetry sensing of siRNAs by the \Drosophila \Loqs-PD/Dcr-2 complex in RNA interference.
"); document.write("
Nucleic Acids Res. 45, 12536-12550 (2017)
"); document.write("
"); document.write("
"); document.write("
Zhang,\ D.*\ ; Wu,\ B.L.*\ ; Wang,\ P.*\ ; Wang,\ Y.*\ ; Lu,\ P.*\ ; Nechiporuk,\ T.*\ ; Floß,\ T.\ ; Greally,\ J.M.*\ ; Zheng,\ D.*\ ; Zhou,\ B.*
"); document.write("
Non-CpG methylation by DNMT3B facilitates REST binding and gene silencing in developing mouse hearts.
"); document.write("
Nucleic Acids Res. 45, 3102-3115 (2017)
"); document.write("
"); document.write("
"); document.write("
Gunnell,\ A.*\ ; Webb,\ H.M.*\ ; Wood,\ C.D.*\ ; McClellan,\ M.J.*\ ; Wichaidit,\ B.*\ ; Kempkes,\ B.\ ; Jenner,\ R.G.*\ ; Osborne,\ C.*\ ; Farrell,\ P.J.*\ ; West,\ M.J.*
"); document.write("
\RUNX \super-enhancer control through the Notch pathway by Epstein-Barr virus transcription factors regulates B cell growth.
"); document.write("
Nucleic Acids Res. 44, 4636-4650 (2016)
"); document.write("
"); document.write("
"); document.write("
Haar,\ J.*\ ; Contrant,\ M.*\ ; Bernhardt,\ K.*\ ; Feederle,\ R.\ ; Diederichs,\ S.*\ ; Pfeffer,\ S.*\ ; Delecluse,\ H.J.*
"); document.write("
The expression of a viral microRNA is regulated by clustering to allow optimal B cell transformation.
"); document.write("
Nucleic Acids Res. 44, 1326-1341 (2016)
"); document.write("
"); document.write("
"); document.write("
Huerta-Cepas,\ J.*\ ; Szklarczyk,\ D.*\ ; Forslund,\ K.*\ ; Cook,\ H.*\ ; Heller,\ D.*\ ; Walter,\ M.C.\ ; Rattei,\ T.*\ ; Mende,\ D.R.*\ ; Sunagawa,\ S.*\ ; Kuhn,\ M.*\ ; Jensen,\ L.J.*\ ; von Mering,\ C.*\ ; Bork,\ P.*
"); document.write("
eggNOG 4.5: A hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences.
"); document.write("
Nucleic Acids Res. 44, D286-D293 (2016)
"); document.write("
"); document.write("
"); document.write("
Ketterer,\ S.*\ ; Gladis,\ L.*\ ; Kozica,\ A.*\ ; Meier,\ M.
"); document.write("
Engineering and characterization of fluorogenic glycine riboswitches.
"); document.write("
Nucleic Acids Res. 44, 5983-5992 (2016)
"); document.write("
"); document.write("
"); document.write("
Nagarajan,\ S.*\ ; Bedi,\ U.*\ ; Budida,\ A.*\ ; Hamdan,\ F.H.*\ ; Mishra,\ V.K.*\ ; Najafova,\ Z.*\ ; Xie,\ W.*\ ; Alawi,\ M.*\ ; Indenbirken,\ D.*\ ; Knapp,\ S.*\ ; Chiang,\ C.M.*\ ; Grundhoff,\ A.*\ ; Kari,\ V.*\ ; Scheel,\ C.\ ; Wegwitz,\ F.*\ ; Johnsen,\ S.A.*
"); document.write("
BRD4 promotes p63 and GRHL3 expression downstream of FOXO in mammary epithelial cells.
"); document.write("
Nucleic Acids Res. 45, 3130-3145 (2016)
"); document.write("
"); document.write("
"); document.write("
Spannagl,\ M.\ ; Nussbaumer,\ T.\ ; Bader,\ K.C.\ ; Martis,\ M.M.\ ; Seidel,\ M.\ ; Kugler,\ K.G.\ ; Gundlach,\ H.\ ; Mayer,\ K.F.X.
"); document.write("
PGSB PlantsDB: Updates to the database framework for comparative plant genome research.
"); document.write("
Nucleic Acids Res. 44, D1141-D1147 (2016)
"); document.write("
"); document.write("
"); document.write("
Anosova,\ I.\ ; Melnik,\ S.*\ ; Tripsianes,\ K.\ ; Kateb,\ F.\ ; Grummt,\ I.*\ ; Sattler,\ M.
"); document.write("
A novel RNA binding surface of the TAM domain of TIP5/BAZ2A mediates epigenetic regulation of rRNA genes.
"); document.write("
Nucleic Acids Res. 43, 5208-5220 (2015)
"); document.write("
"); document.write("
"); document.write("
Cheng,\ Y.\ ; Perocchi,\ F.
"); document.write("
ProtPhylo: Identification of protein-phenotype and protein-protein functional associations via phylogenetic profiling.
"); document.write("
Nucleic Acids Res. 41, W160-W168 (2015)
"); document.write("
"); document.write("
"); document.write("
INFRAFRONTIER Consortium (de Castro,\ A. ; Fessele,\ S. ; Steinkamp,\ R. ; Hagn,\ M. ; Raess,\ M. ; Hrabě de Angelis,\ M. ; Meehan,\ T.F.*)
"); document.write("
INFRAFRONTIER - providing mutant mouse resources as research tools for the international scientific community.
"); document.write("
Nucleic Acids Res. 53, D1171-D1175 (2015)
"); document.write("
"); document.write("
"); document.write("
Ketterer,\ S.*\ ; Fuchs,\ D.*\ ; Weber,\ W.*\ ; Meier,\ M.
"); document.write("
Systematic reconstruction of binding and stability landscapes of the fluorogenic aptamer spinach.
"); document.write("
Nucleic Acids Res. 43, 9564-9572 (2015)
"); document.write("
"); document.write("
"); document.write("
Mannil,\ D.\ ; Vogt,\ I.\ ; Prinz,\ J.\ ; Campillos,\ M.
"); document.write("
Organ system heterogeneity DB: A database for the visualization of phenotypes at the organ system level.
"); document.write("
Nucleic Acids Res. 43, D900-D906 (2015)
"); document.write("
"); document.write("
"); document.write("
Mulholland,\ C.B.*\ ; Smets,\ M.*\ ; Schmidtmann,\ E.*\ ; Leidescher,\ S.*\ ; Markaki,\ Y.*\ ; Hofweber,\ M.*\ ; Qin,\ W.*\ ; Manzo,\ M.*\ ; Kremmer,\ E.\ ; Thanisch,\ K.*\ ; Bauer,\ C.*\ ; Rombaut,\ P.*\ ; Herzog,\ F.*\ ; Leonhardt,\ H.*\ ; Bultmann,\ S.*
"); document.write("
A modular open platform for systematic functional studies under physiological conditions.
"); document.write("
Nucleic Acids Res. 43:e112 (2015)
"); document.write("
"); document.write("
"); document.write("
Schraivogel,\ D.*\ ; Schindler,\ S.G.*\ ; Danner,\ J.*\ ; Kremmer,\ E.\ ; Pfaff,\ J.*\ ; Hannus,\ S.*\ ; Depping,\ R.*\ ; Meister,\ G.*
"); document.write("
Importin-\β facilitates nuclear import of human GW proteins and balances cytoplasmic gene silencing protein levels.
"); document.write("
Nucleic Acids Res. 43, 7447-7461 (2015)
"); document.write("
"); document.write("
"); document.write("
Truong,\ D.J.J.\ ; Kühner,\ K.\ ; Kühn,\ R.\ ; Werfel,\ S.*\ ; Engelhardt,\ S.*\ ; Wurst,\ W.\ ; Ortiz,\ O.
"); document.write("
Development of an intein-mediated split-Cas9 system for gene therapy.
"); document.write("
Nucleic Acids Res. 43, 6450-6458 (2015)
"); document.write("
"); document.write("
"); document.write("
Arnold,\ R.*\ ; Goldenberg,\ F.*\ ; Mewes,\ H.-W.\ ; Rattei,\ T.*
"); document.write("
SIMAP - the database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage.
"); document.write("
Nucleic Acids Res. 42, D279-D284 (2014)
"); document.write("
"); document.write("
"); document.write("
Bazot,\ Q.*\ ; Deschamps,\ T.*\ ; Tafforeau,\ L.*\ ; Siouda,\ M.*\ ; Leblanc,\ P.*\ ; Harth-Hertle,\ M.L.\ ; Rabourdin-Combe,\ C.*\ ; Lotteau,\ V.*\ ; Kempkes,\ B.\ ; Tommasino,\ M.*\ ; Gruffat,\ H.*\ ; Manet,\ E.*
"); document.write("
Epstein-Barr virus nuclear antigen 3A protein regulates CDKN2B transcription via interaction with MIZ-1.
"); document.write("
Nucleic Acids Res. 42, 9700-9716 (2014)
"); document.write("
"); document.write("
"); document.write("
Bleves,\ S.*\ ; Dunger,\ I.\ ; Walter,\ M.C.\ ; Frangoulidis,\ D.*\ ; Kastenmüller,\ G.\ ; Voulhoux,\ R.*\ ; Ruepp,\ A.
"); document.write("
HoPaCI-DB: Host-\Pseudomonas\ and \Coxiella\ interaction database.
"); document.write("
Nucleic Acids Res. 42, D671-D676 (2014)
"); document.write("
"); document.write("
"); document.write("
Blohm,\ P.\ ; Frishman,\ G.\ ; Smialowski,\ P.\ ; Goebels,\ F.*\ ; Wachinger,\ B.\ ; Ruepp,\ A.\ ; Frishman,\ D.
"); document.write("
Negatome 2.0: A database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis.
"); document.write("
Nucleic Acids Res. 42, D396-D400 (2014)
"); document.write("
"); document.write("
"); document.write("
Ellwanger,\ D.C.\ ; Leonhardt,\ J.\ ; Mewes,\ H.-W.
"); document.write("
Large-scale modeling of condition-specific gene regulatory networks by information integration and inference.
"); document.write("
Nucleic Acids Res. 42:e166 (2014)
"); document.write("
"); document.write("
"); document.write("
Frankenberger,\ S.\ ; Davari,\ K.*\ ; Fischer-Burkart,\ S.\ ; Böttcher,\ K.*\ ; Tomi,\ N.S.*\ ; Zimber-Strobl,\ U.\ ; Jungnickel,\ B.
"); document.write("
Checkpoint kinase 1 negatively regulates somatic hypermutation.
"); document.write("
Nucleic Acids Res. 42, 3666-3674 (2014)
"); document.write("
"); document.write("
"); document.write("
Gustems,\ M.\ ; Woellmer,\ A.\ ; Rothbauer,\ U.*\ ; Eck,\ S.H.\ ; Wieland,\ T.\ ; Lutter,\ D.\ ; Hammerschmidt,\ W.
"); document.write("
c-Jun/c-Fos heterodimers regulate cellular genes via a newly identified class of methylated DNA sequence motifs.
"); document.write("
Nucleic Acids Res. 42, 3059-3072 (2014)
"); document.write("
"); document.write("
"); document.write("
Heim,\ A.*\ ; Grimm,\ C.*\ ; Müller,\ U.*\ ; Häußler,\ S.*\ ; Mackeen,\ M.M.*\ ; Merl,\ J.\ ; Hauck,\ S.M.\ ; Kessler,\ B.M.*\ ; Schofield,\ C.J.*\ ; Wolf,\ A.\ ; Böttger,\ A.*
"); document.write("
Jumonji domain containing protein 6 (Jmjd6) modulates splicing and specifically interacts with arginine-serine-rich (RS) domains of SR- and SR-like proteins.
"); document.write("
Nucleic Acids Res. 42, 7833-7850 (2014)
"); document.write("
"); document.write("
"); document.write("
Ullius,\ A.*\ ; Luscher-Firzlaff,\ J.*\ ; Costa,\ I.G.*\ ; Walsemann,\ G.*\ ; Forst,\ A.H.*\ ; Gusmao,\ E.G.*\ ; Kapelle,\ K.\ ; Kleine,\ H.*\ ; Kremmer,\ E.\ ; Vervoorts,\ J.*\ ; Lüscher,\ B.*
"); document.write("
The interaction of MYC with the trithorax protein ASH2L promotes gene transcription by regulating H3K27 modification.
"); document.write("
Nucleic Acids Res. 42, 6901-6920 (2014)
"); document.write("
"); document.write("
"); document.write("
Wang,\ I.\ ; Hennig,\ J.\ ; Jagtap,\ P.K.\ ; Sonntag,\ M.\ ; Valcárcel,\ J.*\ ; Sattler,\ M.
"); document.write("
Structure, dynamics and RNA binding of the multi-domain splicing factor TIA-1.
"); document.write("
Nucleic Acids Res. 42, 5949-5966 (2014)
"); document.write("
"); document.write("
"); document.write("
Chursov,\ A.*\ ; Kopetzky,\ S.J.*\ ; Bocharov,\ G.*\ ; Frishman,\ D.\ ; Shneider,\ A.*
"); document.write("
RNAtips: Analysis of temperature-induced changes of RNA secondary structure.
"); document.write("
Nucleic Acids Res. 41, W486-W491 (2013)
"); document.write("
"); document.write("
"); document.write("
Chursov,\ A.*\ ; Frishman,\ D.\ ; Shneider,\ A.*
"); document.write("
Conservation of mRNA secondary structures may filter out mutations in \Escherichia coli\ evolution.
"); document.write("
Nucleic Acids Res. 41, 7854-7860 (2013)
"); document.write("
"); document.write("
"); document.write("
de la Vega,\ L.*\ ; Hornung,\ J.*\ ; Kremmer,\ E.\ ; Milanovic,\ M.*\ ; Schmitz,\ M.L.*
"); document.write("
Homeodomain-interacting protein kinase 2-dependent repression of myogenic differentiation is relieved by its caspase-mediated cleavage.
"); document.write("
Nucleic Acids Res. 41, 5731-5745 (2013)
"); document.write("
"); document.write("
"); document.write("
Garg,\ D.\ ; Beribisky,\ A.V.\ ; Ponterini,\ G.*\ ; Ligabue,\ A.*\ ; Marverti,\ G.*\ ; Martello,\ A.*\ ; Costi,\ M.P.*\ ; Sattler,\ M.\ ; Wade,\ R.C.*
"); document.write("
Translational repression of thymidylate synthase by targeting its mRNA.
"); document.write("
Nucleic Acids Res. 41, 4159-4170 (2013)
"); document.write("
"); document.write("
"); document.write("
Gu,\ B.*\ ; Eick,\ D.\ ; Bensaude,\ O.*
"); document.write("
CTD serine-2 plays a critical role in splicing and termination factor recruitment to RNA polymerase II \in vivo\.
"); document.write("
Nucleic Acids Res. 41, 1591-1603 (2013)
"); document.write("
"); document.write("
"); document.write("
Ivankov,\ D.N.*\ ; Bogatyreva,\ N.S.*\ ; Honigschmid,\ P.*\ ; Dislich,\ B.*\ ; Högl,\ S.*\ ; Kuhn,\ P.H.*\ ; Frishman,\ D.\ ; Lichtenthaler,\ S.F.*
"); document.write("
QARIP: A web server for quantitative proteomic analysis of regulated intramembrane proteolysis.
"); document.write("
Nucleic Acids Res. 41, W459-W464 (2013)
"); document.write("
"); document.write("
"); document.write("
Nussbaumer,\ T.\ ; Martis,\ M.M.\ ; Roessner,\ S.K.\ ; Pfeifer,\ M.\ ; Bader,\ K.C.\ ; Sharma,\ S.\ ; Gundlach,\ H.\ ; Spannagl,\ M.
"); document.write("
MIPS PlantsDB: A database framework for comparative plant genome research.
"); document.write("
Nucleic Acids Res. 41, D1144-D1151 (2013)
"); document.write("
"); document.write("
"); document.write("
Sass,\ S.\ ; Buettner,\ F.\ ; Müller,\ N.S.\ ; Theis,\ F.J.
"); document.write("
A modular framework for gene set analysis integrating multilevel omics data.
"); document.write("
Nucleic Acids Res. 41, 9622-9633 (2013)
"); document.write("
"); document.write("
"); document.write("
Schneider,\ K.*\ ; Fuchs,\ C.\ ; Dobay,\ A.*\ ; Rottach,\ A.*\ ; Qin,\ W.H.*\ ; Wolf,\ P.*\ ; Alvarez-Castro,\ J.M.*\ ; Nalaskowski,\ M.M.*\ ; Kremmer,\ E.\ ; Schmid,\ V.*\ ; Leonhardt,\ H.*\ ; Schermelleh,\ L.*
"); document.write("
Dissection of cell cycle-dependent dynamics of Dnmt1 by FRAP and diffusion-coupled modeling.
"); document.write("
Nucleic Acids Res. 41, 4860-4876 (2013)
"); document.write("
"); document.write("
"); document.write("
Zhang,\ Y.-Y.\ ; Madl,\ T.\ ; Bagdiul,\ I.*\ ; Kern,\ T.\ ; Kang,\ H.-S.\ ; Zou,\ P.\ ; Mäusbacher,\ N.*\ ; Sieber,\ S.A.*\ ; Krämer,\ A.*\ ; Sattler,\ M.
"); document.write("
Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3\'-splice site recognition.
"); document.write("
Nucleic Acids Res. 41, 1343-1354 (2013)
"); document.write("
"); document.write("
"); document.write("
Arakawa,\ H.\ ; Bednar,\ T.*\ ; Wang,\ M.*\ ; Paul,\ K.*\ ; Mladenov,\ E.*\ ; Bencsik-Theilen,\ A.A.*\ ; Iliakis,\ G.*
"); document.write("
Functional redundancy between DNA ligases I and III in DNA replication in vertebrate cells.
"); document.write("
Nucleic Acids Res. 40, 2599-2610 (2012)
"); document.write("
"); document.write("
"); document.write("
Bönisch,\ C.*\ ; Schneider,\ K.*\ ; Pünzeler,\ S.*\ ; Wiedemann,\ S.M.*\ ; Bielmeier,\ C.*\ ; Bocola,\ M.*\ ; Eberl,\ H.C.*\ ; Kuegel,\ W.*\ ; Neumann,\ J.*\ ; Kremmer,\ E.\ ; Leonhardt,\ H.*\ ; Mann,\ M.*\ ; Michaelis,\ J.*\ ; Schermelleh,\ L.*\ ; Hake,\ S.B.*
"); document.write("
H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization.
"); document.write("
Nucleic Acids Res. 40, 5951-5964 (2012)
"); document.write("
"); document.write("
"); document.write("
Chursov,\ A.*\ ; Walter,\ M.C.\ ; Schmidt,\ T.\ ; Mironov,\ A.*\ ; Shneider,\ A.*\ ; Frishman,\ D.
"); document.write("
Sequence-structure relationships in yeast mRNAs.
"); document.write("
Nucleic Acids Res. 40, 956-962 (2012)
"); document.write("
"); document.write("
"); document.write("
He,\ Y.*\ ; Zhang,\ M.*\ ; Ju,\ Y.*\ ; Yu,\ Z.*\ ; Lv,\ D.*\ ; Sun,\ H.*\ ; Yuan,\ W.*\ ; He,\ F.*\ ; Zhang,\ J.*\ ; Li,\ H.*\ ; Li,\ J.*\ ; Wang-Sattler,\ R.\ ; Li,\ Y.*\ ; Zhang,\ G.*\ ; Xie,\ L.*
"); document.write("
dbDEPC 2.0: Updated database of differentially expressed proteins in human cancers.
"); document.write("
Nucleic Acids Res. 40, D964-D971 (2012)
"); document.write("
"); document.write("
"); document.write("
Villar-Garea,\ A.*\ ; Forne,\ I.*\ ; Vetter,\ I.*\ ; Kremmer,\ E.\ ; Thomae,\ A.*\ ; Imhof,\ A.*
"); document.write("
Developmental regulation of N-terminal H2B methylation in \Drosophila melanogaster\.
"); document.write("
Nucleic Acids Res. 40, 1536-1549 (2012)
"); document.write("
"); document.write("
"); document.write("
Antonov,\ A.V.
"); document.write("
BioProfiling.de: Analytical web portal for high-throughput cell biology.
"); document.write("
Nucleic Acids Res. 39, W323-W327 (2011)
"); document.write("
"); document.write("
"); document.write("
Felle,\ M.*\ ; Joppien,\ S.*\ ; Németh,\ A.*\ ; Diermeier,\ S.*\ ; Thalhammer,\ V.*\ ; Dobner,\ T.*\ ; Kremmer,\ E.\ ; Kappler,\ R.*\ ; Längst,\ G.
"); document.write("
The USP7/Dnmt1 complex stimulates the DNA methylation activity of Dnmt1 and regulates the stability of UHRF1.
"); document.write("
Nucleic Acids Res. 39, 8355-8365 (2011)
"); document.write("
"); document.write("
"); document.write("
Jehl,\ M.A.*\ ; Arnold,\ R.*\ ; Rattei,\ T.*
"); document.write("
Effective--a database of predicted secreted bacterial proteins.
"); document.write("
Nucleic Acids Res. 39, D591-D595 (2011)
"); document.write("
"); document.write("
"); document.write("
Kantlehner,\ M.*\ ; Kirchner,\ R.*\ ; Hartmann,\ P.*\ ; Ellwart,\ J.W.\ ; Alunni-Fabbroni,\ M.*\ ; Schumacher,\ A.*
"); document.write("
A high-throughput DNA methylation analysis of a single cell.
"); document.write("
Nucleic Acids Res. 39, e44:e44 (2011)
"); document.write("
"); document.write("
"); document.write("
Luo,\ Q.*\ ; Pagel,\ P.\ ; Vilne,\ B.*\ ; Frishman,\ D.
"); document.write("
DIMA 3.0: Domain Interaction Map.
"); document.write("
Nucleic Acids Res. 39, 1, D724-D729 (2011)
"); document.write("
"); document.write("
"); document.write("
Ringwald,\ M.*\ ; Iyer,\ V.*\ ; Mason,\ J.C.*\ ; Stone,\ K.R.*\ ; Tadepally,\ H.D.*\ ; Kadin,\ J.A.*\ ; Bult,\ C.J.*\ ; Eppig,\ J.T.*\ ; Oakley,\ D.J.*\ ; Briois,\ S.*\ ; Stupka,\ E.*\ ; Maselli,\ V.*\ ; Smedley,\ D.*\ ; Liu,\ S.Y.*\ ; Hansen,\ J.\ ; Baldock,\ R.*\ ; Hicks,\ G.G.*\ ; Skarnes,\ W.C.*
"); document.write("
The IKMC web portal: A central point of entry to data and resources from the International Knockout Mouse Consortium.
"); document.write("
Nucleic Acids Res. 39, 1, D849-D855 (2011)
"); document.write("
"); document.write("
"); document.write("
Wong,\ P.\ ; Walter,\ M.\ ; Lee,\ W.\ ; Mannhaupt,\ G.\ ; Münsterkötter,\ M.\ ; Mewes,\ H.-W.\ ; Adam,\ G.*\ ; Güldener,\ U.
"); document.write("
FGDB: Revisiting the genome annotation of the plant pathogen Fusarium graminearum.
"); document.write("
Nucleic Acids Res. 39, D637-D639 (2011)
"); document.write("
"); document.write("
"); document.write("
Antonov,\ A.V.\ ; Schmidt,\ E.E.*\ ; Dietmann,\ S.\ ; Krestyaninova,\ M.*\ ; Hermjakob,\ H.*
"); document.write("
R spider: A network-based analysis of gene lists by combining signaling and metabolic pathways from Reactome and KEGG databases.
"); document.write("
Nucleic Acids Res. 38, 2, W78-W83 (2010)
"); document.write("
"); document.write("
"); document.write("
Dietmann,\ S.*\ ; Lee,\ W.\ ; Wong,\ P.\ ; Rodchenkov,\ I.*\ ; Antonov,\ A.V.
"); document.write("
CCancer: A bird\'s eye view on gene lists reported in cancer-related studies.
"); document.write("
Nucleic Acids Res. 38, 2, W118-W123 (2010)
"); document.write("
"); document.write("
"); document.write("
Ertongur,\ I.\ ; Tomi,\ N.S.\ ; Kutzera,\ A.\ ; Fischer-Burkart,\ S.\ ; Jungnickel,\ B.
"); document.write("
Ubc13 dosage is critical for immunoglobulin gene conversion and gene targeting in vertebrate cells.
"); document.write("
Nucleic Acids Res. 38, 4701-4707 (2010)
"); document.write("
"); document.write("
"); document.write("
Mewes,\ H.-W.\ ; Ruepp,\ A.\ ; Theis,\ F.J.\ ; Rattei,\ T.*\ ; Walter,\ M.C.\ ; Frishman,\ D.\ ; Suhre,\ K.\ ; Spannagl,\ M.\ ; Mayer,\ K.F.X.\ ; Stuempflen,\ V.\ ; Antonov,\ A.
"); document.write("
MIPS: Curated databases and comprehensive secondary data resources in 2010.
"); document.write("
Nucleic Acids Res. 39, 1, D220-D224 (2010)
"); document.write("
"); document.write("
"); document.write("
Morgan,\ H.*\ ; Beck,\ T.*\ ; Blake,\ A.*\ ; Gates,\ H.*\ ; Adams,\ N.*\ ; Debouzy,\ G.*\ ; Leblanc,\ S.*\ ; Lengger,\ C.\ ; Maier,\ H.\ ; Melvin,\ D.*\ ; Meziane,\ H.*\ ; Richardson,\ D.*\ ; Wells,\ S.*\ ; White,\ J.*\ ; Wood,\ J.*\ ; EUMODIC Consortium (Hrabě de Angelis,\ M. ; Gailus-Durner,\ V. ; Fuchs,\ H. ; Adler,\ T. ; Aguilar-Pimentel,\ J.A. ; Becker,\ L. ; Beckeredjian,\ R ; Busch,\ D.H. ; Calzada-Wack,\ J. ; Da Silva-Buttkus,\ P. ; Esposito,\ I. ; Favor,\ J. ; Fleischmann,\ W. ; Garrett,\ L. ; Glasl,\ L. ; Götz,\ A. ; Graw,\ J. ; Hans,\ W,\ ; Hölter,\ S.M. ; Ivandic,\ B. ; Katus,\ H.A. ; Klingenspor,\ M. ; Klopstock,\ T. ; Lengger,\ C. ; Ludwig,\ T. ; Maier,\ H. ; Micklich,\ K. ; Minxuan,\ S. ; Naton,\ B. ; Neff,\ F. ; Ollert,\ M. ; Puk,\ O. ; Quintanilla-Fend,\ L. ; Rácz,\ I. ; Rathkolb,\ B. ; Rozman,\ J. ; Schäble,\ K.-H. ; Schiller,\ E. ; Schrewe,\ A. ; Steinkamp,\ R. ; Stoeger,\ C. ; Stöger,\ T. ; Schulz,\ S. ; Tost,\ M. ; Treise,\ I. ; Vogt Weisenhorn,\ D.M. ; Willershäuser,\ M. ; Wolf,\ E. ; Zimprich,\ A. ; Wurst,\ W. ; Zeh,\ R.M. ; Zimmer,\ A.)\ ; Hrabě de Angelis,\ M.\ ; Brown,\ S.*\ ; Hancock,\ J.M.*\ ; Mallon,\ A.M.*
"); document.write("
EuroPhenome: A repository for high-throughput mouse phenotyping data.
"); document.write("
Nucleic Acids Res. 38, 1, D577-D585 (2010)
"); document.write("
"); document.write("
"); document.write("
Rattei,\ T.*\ ; Tischler,\ P.*\ ; Götz,\ S.*\ ; Jehl,\ M.A.*\ ; Hoser,\ J.D.S.*\ ; Arnold,\ R.*\ ; Conesa,\ A.*\ ; Mewes,\ H.-W.
"); document.write("
SIMAP - a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters.
"); document.write("
Nucleic Acids Res. 38, 1, D223-D226 (2010)
"); document.write("
"); document.write("
"); document.write("
Ruepp,\ A.\ ; Wägele,\ B.\ ; Lechner,\ M.\ ; Brauner,\ B.\ ; Dunger-Kaltenbach,\ I.\ ; Fobo,\ G.\ ; Frishman,\ G.\ ; Montrone,\ C.\ ; Mewes,\ H.-W.
"); document.write("
CORUM: The comprehensive resource of mammalian protein complexes - 2009.
"); document.write("
Nucleic Acids Res. 38, 1, D497-D501 (2010)
"); document.write("
"); document.write("
"); document.write("
Schebelle,\ L.\ ; Wolf,\ C.\ ; Stribl,\ C.B.\ ; Javaheri,\ T.\ ; Schnütgen,\ F.*\ ; Ettinger,\ A.\ ; Ivics,\ Z.*\ ; Hansen,\ J.\ ; Ruiz,\ P.*\ ; von Melchner,\ H.*\ ; Wurst,\ W.\ ; Floß,\ T.
"); document.write("
Efficient conditional and promoter-specific\ in vivo \expression of cDNAs of choice by taking advantage of recombinase-mediated cassette exchange using FlEx gene traps.
"); document.write("
Nucleic Acids Res. 38, e106-e106:e106 (2010)
"); document.write("
"); document.write("
"); document.write("
Smialowski,\ P.\ ; Pagel,\ P.\ ; Wong,\ P.\ ; Brauner,\ B.\ ; Dunger,\ I.\ ; Fobo,\ G.\ ; Frishman,\ G.\ ; Montrone,\ C.\ ; Rattei,\ T.*\ ; Frishman,\ D.\ ; Ruepp,\ A.
"); document.write("
The Negatome database: A reference set of non-interacting protein pairs.
"); document.write("
Nucleic Acids Res. 38, 1, D540-D544 (2010)
"); document.write("
"); document.write("
"); document.write("
Steininger,\ S.\ ; Ahne,\ F.\ ; Winkler,\ K.\ ; Kleinschmidt,\ A.\ ; Eckardt-Schupp,\ F.\ ; Mörtl,\ S.
"); document.write("
A novel function for the Mre11-Rad50-Xrs2 complex in base excision repair.
"); document.write("
Nucleic Acids Res. 38, 1853-1865 (2010)
"); document.write("
"); document.write("
"); document.write("
Wilkinson,\ P.*\ ; Sengerova,\ J.*\ ; Matteoni,\ R.*\ ; Chen,\ C-K.*\ ; Soulat,\ G.*\ ; Ureta-Vidal,\ A.*\ ; Fessele,\ S.\ ; Hagn,\ M.\ ; Massimi,\ M.*\ ; Pickford,\ K.*\ ; Butler,\ R.H.*\ ; Marschall,\ S.\ ; Mallon,\ A.-M.*\ ; Pickard,\ A.*\ ; Raspa,\ M.*\ ; Scavizzi,\ F.*\ ; Fray,\ M.*\ ; Larrigaldie,\ V.*\ ; Leyritz,\ J.*\ ; Birney,\ E.*\ ; Tocchini-Valentini,\ G.P.*\ ; Brown,\ S.*\ ; Herault,\ Y.*\ ; Montoliu,\ L.*\ ; Hrabě de Angelis,\ M.\ ; Smedley,\ D.*
"); document.write("
EMMA - mouse mutant resources for the international scientific community.
"); document.write("
Nucleic Acids Res. 38, D570-D576 (2010)
"); document.write("
"); document.write("
"); document.write("
Antonov,\ A.V.\ ; Dietmann,\ S.\ ; Wong,\ P.\ ; Lutter,\ D.\ ; Mewes,\ H.-W.
"); document.write("
GeneSet2miRNA: Finding the signature of cooperative miRNA activities in the gene lists.
"); document.write("
Nucleic Acids Res. 37, Suppl. S, W323-W328 (2009)
"); document.write("
"); document.write("
"); document.write("
Hackenberg,\ M.*\ ; Sturm,\ M.\ ; Langenberger,\ D.*\ ; Falcón-Pérez,\ J.M.*\ ; Aransay,\ A.M.*
"); document.write("
miRanalyzer: A microRNA detection and analysis tool for next-generation sequencing experiments.
"); document.write("
Nucleic Acids Res. 37, (Suppl.1), W68-W76 (2009)
"); document.write("
"); document.write("
"); document.write("
Stephan,\ H.*\ ; Concannon,\ C.*\ ; Kremmer,\ E.\ ; Carty,\ M.P.*\ ; Nasheuer,\ H.P.*
"); document.write("
Ionizing radiation-dependent and independent phosphorylation of the 32-kDa subunit of replication protein A during mitosis.
"); document.write("
Nucleic Acids Res. 37, 6028-6041 (2009)
"); document.write("
"); document.write("
"); document.write("
Antonov,\ A.V.\ ; Schmidt,\ T.*\ ; Wang,\ Y.\ ; Mewes,\ H.-W.
"); document.write("
ProfCom: A web tool for profiling the complex functionality of gene groups identified from high-throughput data.
"); document.write("
Nucleic Acids Res. 36, W347-W351 (2008)
"); document.write("
"); document.write("
"); document.write("
Arakawa,\ H.\ ; Kudo,\ H.\ ; Batrak,\ V.\ ; Caldwell,\ R.B.\ ; Rieger,\ M.\ ; Ellwart,\ J.W.\ ; Buerstedde,\ J.-M.
"); document.write("
Protein evolution by hypermutation and selection in the B cell line DT40.
"); document.write("
Nucleic Acids Res. 36:e1 (2008)
"); document.write("
"); document.write("
"); document.write("
Barth,\ S.*\ ; Pfuhl,\ T.*\ ; Mamiani,\ A.*\ ; Ehses,\ C.*\ ; Roemer,\ K.*\ ; Kremmer,\ E.\ ; Jäker,\ C.*\ ; Höck,\ J.*\ ; Meister,\ G.*\ ; Grässer,\ F.A.*
"); document.write("
Epstein-Barr virus-encoded microRNA miR-BART2 down-regulates the viral DNA polymerase BALF5.
"); document.write("
Nucleic Acids Res. 36, 666-675 (2008)
"); document.write("
"); document.write("
"); document.write("
Duszczyk,\ M.M.\ ; Zanier,\ K.*\ ; Sattler,\ M.
"); document.write("
A NMR strategy to unambiguously distinguish nucleic acid hairpin and duplex conformations applied to a Xist RNA A-repeat.
"); document.write("
Nucleic Acids Res. 36, 7068-7077 (2008)
"); document.write("
"); document.write("
"); document.write("
Greiner,\ S.*\ ; Wang,\ X.\ ; Rauwolf,\ U.*\ ; Silber,\ M.V.*\ ; Mayer,\ K.F.X.\ ; Meurer,\ J.*\ ; Haberer,\ G.\ ; Herrmann,\ R.G.*
"); document.write("
The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. Sequence evaluation and plastome evolution.
"); document.write("
Nucleic Acids Res. 36, 2366-2378 (2008)
"); document.write("
"); document.write("
"); document.write("
Izzo,\ A.*\ ; Regnard,\ C.*\ ; Morales,\ V.*\ ; Kremmer,\ E.\ ; Becker,\ P.B.*
"); document.write("
Structure-function analysis of the RNA helicase maleless.
"); document.write("
Nucleic Acids Res. 36, 950-962 (2008)
"); document.write("
"); document.write("
"); document.write("
Mewes,\ H.-W.\ ; Dietmann,\ S.\ ; Frishman,\ D.*\ ; Gregory,\ R.\ ; Mannhaupt,\ G.\ ; Mayer,\ K.F.X.\ ; Münsterkötter,\ M.\ ; Ruepp,\ A.\ ; Spannagl,\ M.\ ; Stuempflen,\ V.\ ; Rattei,\ T.*
"); document.write("
MIPS: Analysis and annotation of genome information in 2007.
"); document.write("
Nucleic Acids Res. 36, D196-D201 (2008)
"); document.write("
"); document.write("
"); document.write("
Mierau,\ M.\ ; Drexler,\ G.A.\ ; Kutzera,\ A.\ ; Braunschmidt,\ K.\ ; Ellwart,\ J.W.\ ; Eckardt-Schupp,\ F.\ ; Fritz,\ E.*\ ; Bachl,\ J.*\ ; Jungnickel,\ B.
"); document.write("
Non-conservative homologous recombination in human B lymphocytes is promoted by activation-induced cytidine deaminase and transcription.
"); document.write("
Nucleic Acids Res. 36, 5591-5601 (2008)
"); document.write("
"); document.write("
"); document.write("
Pagel,\ P.\ ; Oesterheld,\ M.\ ; Tovstukhina,\ O.*\ ; Strack,\ N.*\ ; Stuempflen,\ V.\ ; Frishman,\ D.
"); document.write("
DIMA 2.0 - predicted and known domain interactions.
"); document.write("
Nucleic Acids Res. 36, D651-655 (2008)
"); document.write("
"); document.write("
"); document.write("
Pich,\ D.\ ; Hummer,\ S.\ ; Spindler,\ M.-P.\ ; Schepers,\ A.\ ; Hammerschmidt,\ W.
"); document.write("
Conditional gene vectors regulated in cis.
"); document.write("
Nucleic Acids Res. 36:e83 (2008)
"); document.write("
"); document.write("
"); document.write("
Rattei,\ T.*\ ; Tischler,\ P.*\ ; Arnold,\ R.*\ ; Hamberger,\ F.*\ ; Krebs,\ J.*\ ; Krumsiek,\ J.*\ ; Wachinger,\ B.*\ ; Stuempflen,\ V.\ ; Mewes,\ H.-W.
"); document.write("
SIMAP\­-structuring the network of protein similarities.
"); document.write("
Nucleic Acids Res. 36, D289-D292 (2008)
"); document.write("
"); document.write("
"); document.write("
Ruepp,\ A.\ ; Brauner,\ B.\ ; Dunger-Kaltenbach,\ I.\ ; Frishman,\ G.\ ; Montrone,\ C.\ ; Stransky,\ M.\ ; Wägele,\ B.\ ; Schmidt,\ T.*\ ; Doudieu,\ O.N.\ ; Stuempflen,\ V.\ ; Mewes,\ H.-W.
"); document.write("
CORUM: The comprehensive resource of mammalian protein complexes.
"); document.write("
Nucleic Acids Res. 36, D646-D650 (2008)
"); document.write("
"); document.write("
"); document.write("
Schnütgen,\ F.*\ ; Hansen,\ J.\ ; De-Zolt,\ S.*\ ; Horn,\ C.*\ ; Lutz,\ M.*\ ; Floß,\ T.\ ; Wurst,\ W.\ ; Ruiz Noppinger,\ P.*\ ; von Melchner,\ H.*
"); document.write("
Enhanced gene trapping in mouse embryonic stem cells.
"); document.write("
Nucleic Acids Res. 36:e133 (2008)
"); document.write("
"); document.write("
"); document.write("
Suhre,\ K.\ ; Schmitt-Kopplin,\ P.
"); document.write("
MassTRIX: Mass translator into pathways.
"); document.write("
Nucleic Acids Res. 36, W481-W484 (2008)
"); document.write("
"); document.write("
"); document.write("
Tanaka,\ T.*\ ; Antonio,\ B.A.*\ ; Kikuchi,\ S.*\ ; Matsumoto,\ T.*\ ; Nagamura,\ Y.*\ ; Numa,\ H.*\ ; Sakai,\ H.*\ ; Wu,\ J.*\ ; Itoh,\ T.*\ ; Sasaki,\ T.*\ ; Aono,\ R.*\ ; Fujii,\ Y.*\ ; Habara,\ T.*\ ; Harada,\ E.*\ ; Kanno,\ M.*\ ; Kawahara,\ Y.*\ ; Kawashima,\ H.*\ ; Kubooka,\ H.*\ ; Matsuya,\ A.*\ ; Nakaoka,\ H.*\ ; Saichi,\ N.*\ ; Sanbonmatsu,\ R.*\ ; Sato,\ Y.*\ ; Shinso,\ Y.*\ ; Suzuki,\ M.*\ ; Takeda,\ J.*\ ; Tanino,\ M.*\ ; Todokoro,\ F.*\ ; Yamaguchi,\ K.*\ ; Yamamoto,\ N.*\ ; Yamasaki,\ C.*\ ; Imanishi,\ T.*\ ; Okido,\ T.*\ ; Tada,\ M.*\ ; Ikeo,\ K.*\ ; Tateno,\ Y.*\ ; Gojobori,\ T.*\ ; Lin,\ YC.*\ ; Wei,\ F.J.*\ ; Hsing,\ Y.I.*\ ; Zhao,\ Q.*\ ; Han,\ B.*\ ; Kramer,\ M.R.*\ ; McCombie,\ R.W.*\ ; Lonsdale,\ D.*\ ; O\'Donovan,\ C.C.*\ ; Whitfield,\ E.J.*\ ; Apweiler,\ R.*\ ; Koyanagi,\ K.O.*\ ; Khurana,\ J.P.*\ ; Raghuvanshi,\ S.*\ ; Singh,\ N.K.*\ ; Tyagi,\ A.K.*\ ; Haberer,\ G.\ ; Fujisawa,\ M.*\ ; Hosokawa,\ S.*\ ; Ito,\ Y.*\ ; Ikawa,\ H.*\ ; Shibata,\ M.*\ ; Yamamoto,\ M.*\ ; Bruskiewich,\ R.M.*\ ; Hoen,\ D.R.*\ ; Bureau,\ T.E.*\ ; Namiki,\ N.*\ ; Ohyanagi,\ H.*\ ; Sakai,\ Y.*\ ; Nobushima,\ S.*\ ; Sakata,\ K.*\ ; Barrero,\ R.A.*\ ; Souvorov,\ A.*\ ; Smith-White,\ B.*\ ; Tatusova,\ T.*\ ; An,\ S.*\ ; An,\ G.*\ ; Oota,\ S.*\ ; Fuks,\ G.*\ ; Messing,\ J.*\ ; Christie,\ K.R.*\ ; Lieberherr,\ D.*\ ; Kim,\ H.*\ ; Zuccolo,\ A.*\ ; Wing,\ R.A.*\ ; Nobuta,\ K.*\ ; Green,\ P.J.*\ ; Lu,\ C.*\ ; Meyers,\ B.C.*\ ; Chaparro,\ C.*\ ; Piegu,\ B.*\ ; Panaud,\ O.*\ ; Echeverria,\ M.*\ ; Rice Annotation Project (*)
"); document.write("
The Rice Annotation Project Database (RAP-DB): 2008 update.
"); document.write("
Nucleic Acids Res. 36, D1028-D1033 (2008)
"); document.write("
"); document.write("
"); document.write("
Wägele,\ B.\ ; Schmidt,\ T.*\ ; Mewes,\ H.-W.\ ; Ruepp,\ A.
"); document.write("
OREST: The online resource for EST analysis.
"); document.write("
Nucleic Acids Res. 36, W140-W144 (2008)
"); document.write("
"); document.write("
"); document.write("
Walter,\ M.C.\ ; Rattei,\ T.*\ ; Arnold,\ R.*\ ; Güldener,\ U.\ ; Münsterkötter,\ M.\ ; Nenova,\ K.\ ; Kastenmüller,\ G.\ ; Tischler,\ P.*\ ; Wölling,\ A.*\ ; Volz,\ A.*\ ; Pongratz,\ N.*\ ; Jost,\ R.*\ ; Mewes,\ H.-W.\ ; Frishman,\ D.
"); document.write("
Pedant covers all complete RefSeq genomes.
"); document.write("
Nucleic Acids Res. 37, D408-D411 (2008)
"); document.write("
"); document.write("
"); document.write("
Fiegler,\ H.*\ ; Geigl,\ J.B.*\ ; Langer,\ S.*\ ; Rigler,\ D.*\ ; Porter,\ K.*\ ; Unger,\ K.\ ; Carter,\ N.P.*\ ; Speicher,\ M.R.*
"); document.write("
High resolution array-CGH analysis of single cells.
"); document.write("
Nucleic Acids Res. 35:e15 (2007)
"); document.write("
"); document.write("
"); document.write("
Hitz,\ C.\ ; Wurst,\ W.\ ; Kühn,\ R.
"); document.write("
Conditional brain-specific knockdown of MAPK using Cre/loxP regulated RNA interference.
"); document.write("
Nucleic Acids Res. 35:e90 (2007)
"); document.write("
"); document.write("
"); document.write("
Hölzel,\ M.\ ; Rohrmoser,\ M.\ ; Orban,\ M.\ ; Hömig,\ C.\ ; Harasim,\ T.\ ; Malamoussi,\ A.\ ; Gruber-Eber,\ A.\ ; Heissmeyer,\ V.\ ; Bornkamm,\ G.W.\ ; Eick,\ D.
"); document.write("
Rapid conditional knock-down\–knock-in system for mammalian cells.
"); document.write("
Nucleic Acids Res. 35:e17 (2007)
"); document.write("
"); document.write("
"); document.write("
Hölzel,\ M.\ ; Grimm,\ T.\ ; Rohrmoser,\ M.\ ; Malamoussi,\ A.\ ; Harasim,\ T.\ ; Gruber-Eber,\ A.\ ; Kremmer,\ E.\ ; Eick,\ D.
"); document.write("
The BRCT domain of mammalian Pes1 is crucial for nucleolar localization and rRNA processing.
"); document.write("
Nucleic Acids Res. 35, 789-800 (2007)
"); document.write("
"); document.write("
"); document.write("
Messaoudi,\ L.*\ ; Yang,\ Y.G.*\ ; Kinomura,\ A.*\ ; Stavreva,\ D.A.*\ ; Yan,\ G.*\ ; Bortolin-Cavaillé,\ ML.*\ ; Arakawa,\ H.\ ; Buerstedde,\ J.M.\ ; Hainaut,\ P.*\ ; Cavaillé,\ J.*\ ; Takata,\ M.*\ ; van Dyck,\ E.*
"); document.write("
Subcellular distribution of human RDM1 protein isoforms and their nucleolar accumulation in response to heat shock and proteotoxic stress.
"); document.write("
Nucleic Acids Res. 35, 6571-6587 (2007)
"); document.write("
"); document.write("
"); document.write("
Riley,\ M.L.\ ; Schmidt,\ T.*\ ; Artamonova,\ I.I.\ ; Wagner,\ C.*\ ; Volz,\ A.*\ ; Heumann,\ K.*\ ; Mewes,\ H.-W.\ ; Frishman,\ D.
"); document.write("
PEDANT genome database: 10 years online.
"); document.write("
Nucleic Acids Res. 35, D354-D357 (2007)
"); document.write("
"); document.write("
"); document.write("
Spannagl,\ M.\ ; Noubibou,\ O.\ ; Haase,\ D.\ ; Yang,\ L.\ ; Gundlach,\ H.\ ; Hindemitt,\ T.\ ; Klee,\ K.\ ; Haberer,\ G.\ ; Schoof,\ H.\ ; Mayer,\ K.F.X.
"); document.write("
MIPSPlantsDB - plant database resource for integrative and comparative plant genome research.
"); document.write("
Nucleic Acids Res. 35, 834-840 (2007)
"); document.write("
"); document.write("
"); document.write("
Antonov,\ A.V.\ ; Tetko,\ I.V.\ ; Mewes,\ H.-W.
"); document.write("
A systematic approach to infer biological relevance and biases of gene network structures.
"); document.write("
Nucleic Acids Res. 34, e6:E6 (2006)
"); document.write("
"); document.write("
"); document.write("
De-Zolt,\ S.*\ ; Schnütgen,\ F.*\ ; Seisenberger,\ C.\ ; Hansen,\ J.\ ; Hollatz,\ M.\ ; Floß,\ T.\ ; Ruiz,\ P.*\ ; Wurst,\ W.\ ; von Melchner,\ H.*
"); document.write("
High-throughput trapping of secretory pathway genes in mouse embryonic stem cells.
"); document.write("
Nucleic Acids Res. 34:e25 (2006)
"); document.write("
"); document.write("
"); document.write("
Grimm,\ T.\ ; Hölzel,\ M.\ ; Rohrmoser,\ M.\ ; Harasim,\ T.\ ; Malamoussi,\ A.\ ; Gruber-Eber,\ A.\ ; Kremmer,\ E.\ ; Eick,\ D.
"); document.write("
Dominant-negative Pes1 mutants inhibit ribosomal RNA processing and cell proliferation via incorporation into the PeBoW-complex.
"); document.write("
Nucleic Acids Res. 34, 3030-3043 (2006)
"); document.write("
"); document.write("
"); document.write("
Güldener,\ U.\ ; Münsterkötter,\ M.\ ; Oesterheld,\ M.\ ; Pagel,\ P.\ ; Ruepp,\ A.\ ; Mewes,\ H.-W.\ ; Stuempflen,\ V.
"); document.write("
MPact: The MIPS protein interaction resource on yeast.
"); document.write("
Nucleic Acids Res. 34, 436-441 (2006)
"); document.write("
"); document.write("
"); document.write("
Güldener,\ U.\ ; Mannhaupt,\ G.*\ ; Münsterkötter,\ M.\ ; Haase,\ M.\ ; Oesterheld,\ M.\ ; Stuempflen,\ V.\ ; Mewes,\ H.-W.\ ; Adam,\ G.*
"); document.write("
FGDB: A comprehensive fungal genome resource on the plant pathogen Fusarium graminearum.
"); document.write("
Nucleic Acids Res. 34, D456-D458 (2006)
"); document.write("
"); document.write("
"); document.write("
Mewes,\ H.-W.\ ; Frishman,\ D.*\ ; Mayer,\ K.F.X.\ ; Münsterkötter,\ M.\ ; Noubibou,\ O.\ ; Pagel,\ P.\ ; Rattei,\ T.*\ ; Oesterheld,\ M.\ ; Ruepp,\ A.\ ; Stuempflen,\ V.
"); document.write("
MIPS: Analysis and annotation of proteins from whole genomes in 2005.
"); document.write("
Nucleic Acids Res. 34, D169-D172 (2006)
"); document.write("
"); document.write("
"); document.write("
Nord,\ A.S.*\ ; Chang,\ P.J.*\ ; Conklin,\ B.R.*\ ; Cox,\ A.V.*\ ; Harper,\ C.A.*\ ; Hicks,\ G.G.*\ ; Huang,\ C.C.*\ ; Johns,\ S.J.*\ ; Kawamoto,\ M.*\ ; Liu,\ S.*\ ; Meng,\ E.C.*\ ; Morris,\ J.H.*\ ; Rossant,\ J.*\ ; Ruiz,\ P.*\ ; Skarnes,\ W.C.*\ ; Soriano,\ P.*\ ; Stanford,\ W.L.*\ ; Stryke,\ D.*\ ; von,\ Melchner,\ H.*\ ; Wurst,\ W.\ ; Yamamura,\ K.*\ ; Young,\ S.G.*\ ; Babbitt,\ P.C.*\ ; Ferrin,\ T.E.
"); document.write("
The International Gene Trap Consortium website: A portal to all publicly available gene trap cell lines in mouse.
"); document.write("
Nucleic Acids Res. 34, D642-D648 (2006)
"); document.write("
"); document.write("
"); document.write("
Prokisch,\ H.\ ; Andreoli,\ C.*\ ; Ahting,\ U.*\ ; Heiss,\ K.*\ ; Ruepp,\ A.\ ; Scharfe,\ C.*\ ; Meitinger,\ T.
"); document.write("
MitoP2: The mitochondrial proteome database-now including mouse data.
"); document.write("
Nucleic Acids Res. 34, D705-D711 (2006)
"); document.write("
"); document.write("
"); document.write("
Rattei,\ T.*\ ; Arnold,\ R.\ ; Tischler,\ P.\ ; Lindner,\ D.*\ ; Stuempflen,\ V.\ ; Mewes,\ H.-W.
"); document.write("
SIMAP: The similarity matrix of proteins.
"); document.write("
Nucleic Acids Res. 34, 252-256 (2006)
"); document.write("
"); document.write("
"); document.write("
Ruepp,\ A.\ ; Doudieu,\ O.N.\ ; van den Oever,\ J.\ ; Brauner,\ B.\ ; Dunger-Kaltenbach,\ I.\ ; Fobo,\ G.\ ; Frishman,\ G.\ ; Montrone,\ C.\ ; Skornia,\ C.\ ; Wanka,\ S.\ ; Rattei,\ T.*\ ; Pagel,\ P.\ ; Riley,\ M.L.\ ; Frishman,\ D.*\ ; Surmeli,\ D.\ ; Tetko,\ I.V.\ ; Oesterheld,\ M.\ ; Stuempflen,\ V.\ ; Mewes,\ H.-W.
"); document.write("
The mouse functional genome database (MfunGD) :Functional annotation of proteins in the light of their cellular context.
"); document.write("
Nucleic Acids Res. 34, D568–D571 (2006)
"); document.write("
"); document.write("
"); document.write("
Shimada,\ N.*\ ; Matsudo,\ H.*\ ; Osano,\ K.*\ ; Arakawa,\ H.\ ; Buerstedde,\ J.-M.\ ; Matsumoto,\ Y.*\ ; Chayahara,\ K.*\ ; Torihata,\ A.*\ ; Ono,\ M.*
"); document.write("
Activation of the chicken Ig-\ß locus by the collaboration of scattered regulatory regions through changes in chromatin structure.
"); document.write("
Nucleic Acids Res. 34, 3794-3802 (2006)
"); document.write("
"); document.write("
"); document.write("
Bornkamm,\ G.W.\ ; Berens,\ Ch.*\ ; Kuklik-Roos,\ C.\ ; Bechet,\ J.-M.*\ ; Laux,\ G.\ ; Bachl,\ J.\ ; Korndörfer,\ M.\ ; Schlee,\ M.\ ; Hölzel,\ M.\ ; Malamoussi,\ A.\ ; Chapman,\ R.
"); document.write("
Stringent doxycycline-dependent control of gene activities using an episomal one-vector system.
"); document.write("
Nucleic Acids Res. 33, 1-11:e137 (2005)
"); document.write("
"); document.write("
"); document.write("
Chen,\ S.*\ ; Davies,\ A.A.*\ ; Sagan,\ D.\ ; Ulrich,\ H.D.*
"); document.write("
The RING finger ATPase Rad5p of\ Saccharomyces cerevisiae\ contributes to DNA double-strand break repair in a ubiquitin-independent manner.
"); document.write("
Nucleic Acids Res. 33, 5878-5886 (2005)
"); document.write("
"); document.write("
"); document.write("
Döhr,\ S.\ ; Klingenhoff,\ A.*\ ; Maier,\ H.\ ; Hrabě de Angelis,\ M.\ ; Werner,\ T.*\ ; Schneider,\ R.
"); document.write("
Linking disease-associated genes to regulatory networks via promoter organization.
"); document.write("
Nucleic Acids Res. 33, 864-872 (2005)
"); document.write("
"); document.write("
"); document.write("
Güldener,\ U.\ ; Münsterkötter,\ M.\ ; Kastenmüller,\ G.\ ; Strack,\ N.*\ ; van Helden,\ J.*\ ; Lemer,\ C.*\ ; Richelles,\ J.*\ ; Wodak,\ S.J.*\ ; García-Martínez,\ J.*\ ; Pérez-Ortín,\ J.E.*\ ; Michael,\ H.*\ ; Kaps,\ A.*\ ; Talla,\ E.*\ ; Dujon,\ B.*\ ; André,\ B.*\ ; Souciet,\ J.L.*\ ; de Montigny,\ J.*\ ; Bon,\ E.*\ ; Gaillardin,\ C.*\ ; Mewes,\ H.-W.
"); document.write("
CYGD: The Comprehensive Yeast Genome Database.
"); document.write("
Nucleic Acids Res. 33, SI, D364-368 (2005)
"); document.write("
"); document.write("
"); document.write("
Kasuga,\ T.*\ ; Townsend,\ J.P.*\ ; Tian,\ C.*\ ; Gilbert,\ L.B.*\ ; Mannhaupt,\ G.\ ; Taylor,\ J.W.*\ ; Glass,\ N.L.*
"); document.write("
Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination.
"); document.write("
Nucleic Acids Res. 33, 6469-6485 (2005)
"); document.write("
"); document.write("
"); document.write("
Klaften,\ M.\ ; Hrabě de Angelis,\ M.
"); document.write("
ARTS: A web-based tool for the set-up of high-throughput genome-wide mapping panels for the SNP genotyping of mouse mutants.
"); document.write("
Nucleic Acids Res. 33, 2, W496-W500 (2005)
"); document.write("
"); document.write("
"); document.write("
Lux,\ Ch.\ ; Albiez,\ H.*\ ; Chapman,\ R.D.\ ; Heidinger,\ M.\ ; Meininghaus,\ M.\ ; Brack-Werner,\ R.\ ; Lang,\ A.\ ; Ziegler,\ M.\ ; Cremer,\ T.\ ; Eick,\ D.
"); document.write("
Transition from initiation to promoter proximal pausing requires the CTD of RNA polymerase II.
"); document.write("
Nucleic Acids Res. 33, 5139-5144 (2005)
"); document.write("
"); document.write("
"); document.write("
Maier,\ H.\ ; Döhr,\ S.\ ; Grote,\ K.\ ; O\'Keeffe,\ S.\ ; Werner,\ T.\ ; Hrabě de Angelis,\ M.\ ; Schneider,\ R.
"); document.write("
LitMiner and WikiGene: Identifying problem-related key players of gene regulation using publication abstracts.
"); document.write("
Nucleic Acids Res. 33, 2, W779-W782 (2005)
"); document.write("
"); document.write("
"); document.write("
Riley,\ M.L.\ ; Schmidt,\ T.*\ ; Wagner,\ C.*\ ; Mewes,\ H.-W.\ ; Frishman,\ D.
"); document.write("
The PEDANT genome database in 2005.
"); document.write("
Nucleic Acids Res. 33, D308-D310 (2005)
"); document.write("
"); document.write("
"); document.write("
Rudd,\ S.*\ ; Schoof,\ H.\ ; Mayer,\ K.F.X.
"); document.write("
PlantMarkers - a database of predicted molecular markers from plants.
"); document.write("
Nucleic Acids Res. 33, 628-632 (2005)
"); document.write("
"); document.write("
"); document.write("
Rudd,\ S.*\ ; Tetko,\ I.V.
"); document.write("
\Éclair - a web service for unravelling species origin of sequences sampled from mixed host interfaces.
"); document.write("
Nucleic Acids Res. 33, 2, W724-W727 (2005)
"); document.write("
"); document.write("
"); document.write("
Andreoli,\ C.\ ; Prokisch,\ H.\ ; Hörtnagel,\ K.\ ; Mueller,\ J.C.\ ; Münsterkötter,\ M.\ ; Scharfe,\ C.*\ ; Meitinger,\ T.
"); document.write("
MitoP2, an integrated databases on mitochondrial proteins in yeast and man.
"); document.write("
Nucleic Acids Res. 32, 459-462 (2004)
"); document.write("
"); document.write("
"); document.write("
Chapman,\ R.D.\ ; Palancade,\ B.*\ ; Lang,\ A.\ ; Bensaude,\ O.*\ ; Eick,\ D.
"); document.write("
The last CTD repeat of the mammalian RNA polymerase II large subunit is important for its stability.
"); document.write("
Nucleic Acids Res. 32, 35-44 (2004)
"); document.write("
"); document.write("
"); document.write("
Mewes,\ H.-W.\ ; Amid,\ C.\ ; Arnold,\ R.\ ; Frishman,\ D.*\ ; Güldener,\ U.\ ; Mannhaupt,\ G.*\ ; Münsterkötter,\ M.\ ; Pagel,\ P.\ ; Strack,\ N.*\ ; Stuempflen,\ V.\ ; Warfsmann,\ J.\ ; Ruepp,\ A.
"); document.write("
MIPS : analysis and annotation of proteins from whole genomes.
"); document.write("
Nucleic Acids Res. 32, D41-D44 (2004)
"); document.write("
"); document.write("
"); document.write("
Ruepp,\ A.\ ; Zollner,\ A.*\ ; Maier,\ D.*\ ; Albermann,\ K.*\ ; Hani,\ J.*\ ; Mokrejs,\ M.\ ; Tetko,\ I.V.\ ; Güldener,\ U.\ ; Mannhaupt,\ G.\ ; Münsterkötter,\ M.\ ; Mewes,\ H.-W.
"); document.write("
The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes.
"); document.write("
Nucleic Acids Res. 32, 5539-5545 (2004)
"); document.write("
"); document.write("
"); document.write("
Schofield,\ P.N.*\ ; Bard,\ J.B.L.*\ ; Booth,\ C.*\ ; Boniver,\ J.*\ ; Covelli,\ V.*\ ; Delvenne,\ P.*\ ; Ellender,\ M.*\ ; Engstrom,\ W.*\ ; Goessner,\ W.\ ; Gruenberger,\ M.*\ ; Höfler,\ H.
"); document.write("
Pathbase: A database of mutant mouse pathology.
"); document.write("
Nucleic Acids Res. 32, D512-D515 (2004)
"); document.write("
"); document.write("
"); document.write("
Schoof,\ H.\ ; Ernst,\ R.\ ; Nazarov,\ V.\ ; Pfeifer,\ L.\ ; Mewes,\ H.-W.\ ; Mayer,\ K.F.X.
"); document.write("
MIPS Arabidopsis thaliana database (MAtDB) An integrated biological knowledge resource for plant genomics.
"); document.write("
Nucleic Acids Res. 32, 373-376 (2004)
"); document.write("
"); document.write("
"); document.write("
Bon,\ E.*\ ; Casaregola,\ S.*\ ; Blandin,\ G.*\ ; Llorente,\ B.*\ ; Neuvéglise,\ C.*\ ; Münsterkötter,\ M.\ ; Güldener,\ U.\ ; Mewes,\ H.-W.\ ; van Helden,\ J.*\ ; Dujon,\ B.*\ ; Gaillardin,\ C.*
"); document.write("
Molecular evolution of eukaryotic genomes: Hemiascomycetous yeast spliceosomal introns.
"); document.write("
Nucleic Acids Res. 31, 1121-1135 (2003)
"); document.write("
"); document.write("
"); document.write("
Drobyshev,\ A.L.\ ; Machka,\ C.\ ; Horsch,\ M.\ ; Seltmann,\ M.\ ; Liebscher,\ V.\ ; Hrabě de Angelis,\ M.\ ; Beckers,\ J.
"); document.write("
Specificity assessment from fractionation experiments (SAFE) : a novel method to evaluate microarray probe specificity based on hybridisation strinencies.
"); document.write("
Nucleic Acids Res. 31, 2-10 (2003)
"); document.write("
"); document.write("
"); document.write("
Karlowski,\ W.M.\ ; Schoof,\ H.\ ; Janakiraman,\ V.\ ; Stuempflen,\ V.\ ; Mayer,\ K.F.X.
"); document.write("
MOsDB : an integrated information resource for rice genomics.
"); document.write("
Nucleic Acids Res. 31, 190-192 (2003)
"); document.write("
"); document.write("
"); document.write("
Schlosser,\ I.\ ; Hölzel,\ M.\ ; Mürnseer,\ M.\ ; Burtscher,\ H.*\ ; Weidle,\ U.H.*\ ; Eick,\ D.
"); document.write("
A role for c-Myc in the regulation of ribosomal RNA processing.
"); document.write("
Nucleic Acids Res. 31, 6148-6156 (2003)
"); document.write("
"); document.write("
"); document.write("
Wolff,\ H.\ ; Brack-Werner,\ R.\ ; Neumann,\ M.\ ; Werner,\ T.\ ; Schneider,\ R.
"); document.write("
Integrated functional and bioinformatics approach for the identification and experimental verification of RNA signals : Application to HIV-1 INS.
"); document.write("
Nucleic Acids Res. 31, 2839-2851 (2003)
"); document.write("
"); document.write("
"); document.write("
Kiechle,\ M.*\ ; Manivasakam,\ P.*\ ; Eckardt-Schupp,\ F.\ ; Schiestl,\ R.H.*\ ; Friedl,\ A.A.*
"); document.write("
Promoter-trapping in Saccharomyces cerevisiae by radiation-assisted fragment insertion.
"); document.write("
Nucleic Acids Res. 30:e136 (2002)
"); document.write("
"); document.write("
"); document.write("
Mewes,\ H.-W.\ ; Frishman,\ D.\ ; Güldener,\ U.\ ; Mannhaupt,\ G.\ ; Mayer,\ K.F.X.\ ; Mokrejs,\ M.\ ; Morgenstern,\ B.\ ; Münsterkötter,\ M.\ ; Rudd,\ S.\ ; Weil,\ B.
"); document.write("
MIPS: A database for genomes and protein sequences.
"); document.write("
Nucleic Acids Res. 30, 31-34 (2002)
"); document.write("
"); document.write("
"); document.write("
Schoof,\ H.\ ; Zaccaria,\ P.\ ; Gundlach,\ H.\ ; Lemcke,\ K.\ ; Rudd,\ S.\ ; Kolesov,\ G.\ ; Arnold,\ R.\ ; Mewes,\ H.-W.\ ; Mayer,\ K.F.X.
"); document.write("
MIPS Arabidopsis thaliana Database (MAtDB): An integrated biological konwledge resource based on the first complete plant genome.
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Nucleic Acids Res. 30, 91-93 (2002)
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Bailly,\ A.*\ ; Torres-Padilla,\ M.E.*\ ; Tinel,\ A.P.*\ ; Weiss,\ M.C.*
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An enhancer element 6 kb upstream of the mouse HNF4alpha1 promoter is activated by glucocorticoids and liver-enriched transcription factors.
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Nucleic Acids Res. 29, 3495-3505 (2001)
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Lengler,\ J.\ ; Krausz,\ E.\ ; Tomarev,\ S.*\ ; Prescott,\ A.*\ ; Quinlan,\ R.A.*\ ; Graw,\ J.
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Antagonistic action of Six3 and Prox1 at the \ϒ-crystallin promoter.
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Nucleic Acids Res. 29, 515-526 (2001)
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Schneider,\ R.*\ ; Lurz,\ R.*\ ; Lüder,\ G.*\ ; Tolksdorf,\ C.*\ ; Travers,\ A.*\ ; Muskhelishvili,\ G.*
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An architectural role of the Escherichia coli chromatin protein FIS in organising DNA.
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Nucleic Acids Res. 29, 5107-5114 (2001)
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Scharfe,\ C.*\ ; Zaccaria,\ P.\ ; Hoertnagel,\ K.*\ ; Jaksch,\ M.*\ ; Klopstock,\ T.*\ ; Dembowski,\ M.*\ ; Lill,\ R.*\ ; Prokisch,\ H.*\ ; Gerbitz,\ K.D.*\ ; Neupert,\ W.*\ ; Mewes,\ H.-W.\ ; Meitinger,\ T.*
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MITOP, the mitochondrial proteome database: 2000 update.
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Nucleic Acids Res. 28, 155-158 (2000)
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Wittekindt,\ N.E.\ ; Hörtnagel,\ K.\ ; Geltinger,\ C.
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Activation of c-myc promoter P1 by immunoglobulin \κ gene enhancers in Burkitt lymphoma: functional characterization of the intron enhancer motifs kB, E box 1 and E box 2 and of the 3\' enhancer motif PU.
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Nucleic Acids Res. 28, 800-808 (2000)
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Immervoll,\ T.\ ; Wjst,\ M.
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Current status of the asthma and allergy database.
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Nucleic Acids Res. 27, 213-214 (1999)
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Brielmeier,\ M.\ ; Bechet,\ J.-M.*\ ; Falk,\ M.H.*\ ; Pawlita,\ M.*\ ; Polack,\ A.\ ; Bornkamm,\ G.W.
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Improving stable transfection efficiency : antioxidants dramatically improve the outgrowth of clones under dominant marker selection.
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Nucleic Acids Res. 26, 2082-2085 (1998)
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Frech,\ K.\ ; Herrmann,\ G.\ ; Werner,\ T.
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Computer-assisted prediction, classification, and delimitation of protein binding sites in nucleic acids.
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Nucleic Acids Res. 21, 1655-1664 (1993)
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Möller,\ E.M.\ ; Bahnweg,\ G.\ ; Sandermann,\ H.\ ; Geiger,\ H.H.
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A Simple and Efficient Protocol for Isolation of High Molecular Weight DNA from Filamentous Fungi, Fruit Bodies, and infected Plant Tissues.
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Nucleic Acids Res. 20, 6115-6116 (1992)
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Werner,\ T.
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A HyperCard-shell for the Human Genome Mapping database (HGM) including a stand-alone reference database.
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Nucleic Acids Res. 19, 1711 (1991)
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Eick,\ D.
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Elongation and Maturation of c-myc RNA is Inhibited by Differentiation Inducing Agents in HL60 Cells.
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Nucleic Acids Res. 18, 1199-1205 (1990)
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Rump,\ A.
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Purification of DNA from agarose by polyethylene glycol induced precipitation.
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Nucleic Acids Res. (1990)
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Werner,\ T.
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A HyperCard-shell for the Human Genome Mapping Database (HGM) Including a Stand-alone Reference Database.
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Nucleic Acids Res. (1990)
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Brack-Werner,\ R.\ ; Werner,\ T.\ ; Leib-Mösch,\ C.\ ; Hehlmann,\ R.\ ; Erfle,\ V.F.
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Primary structure of the SSAV tether-RNase H endonuclease (pol) region deleted in SSV.
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Nucleic Acids Res. 17, 5382 (1989)
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Leib-Mösch,\ C.\ ; Barton,\ D.E.\ ; Geigl,\ E.M.\ ; Brack-Werner,\ R.\ ; Erfle,\ V.F.\ ; Hehlmann,\ R.\ ; Francke.,\ U.
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Two RFLPs associated with the human endogenous retroviral element S71 on chromosome 18q21.
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Nucleic Acids Res. 17, 2367 (1989)
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Mocikat,\ R.\ ; Pruijn,\ G.J.*\ ; van der Vliet,\ P.C.*\ ; Zachau,\ H.G.*
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An ACCC-containing protein-binding sequence in the neighbourhood of the decanucleotide recognition site of the immunoglobulin gene promoter.
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Nucleic Acids Res. 16, 3693-704 (1988)
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Falkner,\ F.G.*\ ; Mocikat,\ R.\ ; Zachau,\ H.G.*
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Sequences closely related to an immunoglobulin gene promoter/enhancer element occur also upstream of other eukaryotic and of prokaryotic genes.
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Nucleic Acids Res. 14, 8819-27 (1986)
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Mocikat,\ R.\ ; Falkner,\ F.G.*\ ; Mertz,\ R.*\ ; Zachau,\ H.G.*
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Upstream regulatory sequences of immunoglobulin genes are recognized by nuclear proteins which also bind to other gene regions.
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Nucleic Acids Res. 14, 8829-8844 (1986)
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Klobeck,\ H.G.*\ ; Bornkamm,\ G.W.*\ ; Combriato,\ G.*\ ; Mocikat,\ R.\ ; Pohlenz,\ H.D.*\ ; Zachau,\ H.G.*
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Subgroup IV of human immunoglobulin K light chains is encoded by a single germline gene.
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Nucleic Acids Res. 13, 6515-6529 (1985)
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