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Dietmann, S.* ; Lee, W. ; Wong, P. ; Rodchenkov, I.* ; Antonov, A.V.

CCancer: A bird's eye view on gene lists reported in cancer-related studies.

Nucleic Acids Res. 38, 2, W118-W123 (2010)
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Creative Commons Lizenzvertrag
CCancer is an automatically collected database of gene lists, which were reported mostly by experimental studies in various biological and clinical contexts. At the moment, the database covers 3369 gene lists extracted from 2644 papers published in approximately 80 peer-reviewed journals. As input, CCancer accepts a gene list. An enrichment analyses is implemented to generate, as output, a highly informative survey over recently published studies that report gene lists, which significantly intersect with the query gene list. A report on gene pairs from the input list which were frequently reported together by other biological studies is also provided. CCancer is freely available at http://mips.helmholtz-muenchen.de/proj/ccancer.
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Publikationstyp Artikel: Journalartikel
Dokumenttyp Wissenschaftlicher Artikel
Schlagwörter EXPRESSION; DATABASE; PROTEOMICS; CONTEXT; TOOL
Sprache englisch
Veröffentlichungsjahr 2010
HGF-Berichtsjahr 2010
ISSN (print) / ISBN 0305-1048
e-ISSN 1362-4962
Zeitschrift Nucleic Acids Research
Quellenangaben Band: 38, Heft: SUPPL. 2, Seiten: W118-W123, Artikelnummer: , Supplement: 2
Verlag Oxford University Press
Begutachtungsstatus Peer reviewed
Institut(e) Institute of Bioinformatics and Systems Biology (IBIS)
POF Topic(s) 30505 - New Technologies for Biomedical Discoveries
Forschungsfeld(er) Enabling and Novel Technologies
PSP-Element(e) G-503700-001
PubMed ID 20529879
DOI 10.1093/nar/gkq515
WOS ID WOS:000284148900020
Scopus ID 77954252774
Erfassungsdatum 2010-12-31
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