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Open Access Green möglich sobald Postprint bei der ZB eingereicht worden ist.
Molecular microbiology methods for environmental diagnosis.
Environ. Chem. Lett. 14, 1-19 (2016)
To reduce the environmental footprint of human activities, the quality of environmental media such as water, soil and the atmosphere should be first assessed. Microorganisms are well suited for a such assessment because they respond fast to environmental changes, they have a huge taxonomic and genetic diversity, and they are actively involved in biogeochemical cycles. Here, we review microbiological methods that provide sensitive and robust indicators for environmental diagnosis. Methods include genomics, transcriptomics, proteomics and metabolomics to study the abundance, diversity, activity and functional potentials of indigenous microbial communities in various environmental matrices such as water, soil, air and waste. We describe the advancement, technical limits and sensitivity of each method. Examples of method application to farming, industrial and urban impact are presented. We rank the most advanced indicators according to their level of operability in the different environmental matrices based on a technology readiness level scale.
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Publikationstyp
Artikel: Journalartikel
Dokumenttyp
Wissenschaftlicher Artikel
Schlagwörter
Bioindicator ; Environmental Diagnosis ; Environmental Matrix ; Molecular Microbiology; Gene-expression; Rhizosphere Microbiome; Community; Diversity; Metaproteomics; Microorganisms; Bacterial; Sea; Dna; Metatranscriptomics
ISSN (print) / ISBN
1610-3653
e-ISSN
1610-3661
Zeitschrift
Environmental Chemistry Letters
Quellenangaben
Band: 14,
Heft: 4,
Seiten: 1-19
Verlag
Springer
Verlagsort
Heidelberg
Nichtpatentliteratur
Publikationen
Begutachtungsstatus
Peer reviewed