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1.
Bouras, G.* et al.: Protein structure-informed bacteriophage genome annotation with Phold. Nucleic Acids Res. 54:gkaf1448 (2026)
2.
Gerhalter, M.* et al.: A comprehensive view on r-protein binding and rRNA domain structuring during early eukaryotic ribosome formation. Nucleic Acids Res. 54:gkag036 (2026)
3.
Apostolou, Z.* et al.: The Tip60 acetylome is a hallmark of the proliferative state in Drosophila. Nucleic Acids Res. 53:gkaf1087 (2025)
4.
Casper, J.* et al.: The UCSC Genome Browser database: 2026 update. Nucleic Acids Res. 54, D1331-D1335 (2025)
5.
Hipp, C. et al.: Molecular mechanisms of biomolecular condensate formation in Drosophila melanogaster siRNA biogenesis. Nucleic Acids Res. 53:gkaf664 (2025)
6.
Mianesaz, H.* et al.: Genomic regions occupied by both RARα and VDR are involved in the convergence and cooperation of retinoid and vitamin D signaling pathways. Nucleic Acids Res. 53:gkaf230 (2025)
7.
Müller-Hermes, C. et al.: Unique conformational dynamics and protein recognition of A-to-I hyper-edited dsRNA. Nucleic Acids Res. 53:gkaf550 (2025)
8.
Pérez-Ràfols, A.* et al.: Deciphering the RNA recognition by Musashi-1 to design protein and RNA variants for in vitro and in vivo applications. Nucleic Acids Res. 53:gkaf741 (2025)
9.
Schmidt, T. et al.: Efficient DNA- and virus-free engineering of cellular transcriptomic states using dCas9 ribonucleoprotein (dRNP) complexes. Nucleic Acids Res. 53:gkaf235 (2025)
10.
Steinkamp, R. et al.: CORUM in 2024: Protein complexes as drug targets. Nucleic Acids Res. 53, D651-D657 (2025)
11.
Türei, D.* et al.: OmniPath: Integrated knowledgebase for multi-omics analysis. Nucleic Acids Res. 54, D652-D660 (2025)
12.
Vilov, S. & Heinig, M.: Investigating the performance of foundation models on human 3'UTR sequences. Nucleic Acids Res. 53:gkaf871 (2025)
13.
Werner, M. et al.: Transcription-replication conflicts drive R-loop-dependent nucleosome eviction and require DOT1L activity for transcription recovery. Nucleic Acids Res. 53:gkaf109 (2025)
14.
Kiss, A.E.* et al.: Processivity and specificity of histone acetylation by the male-specific lethal complex. Nucleic Acids Res. 52, 4889-4905 (2024)
15.
Kuhn, C.K.* et al.: The repertoire and structure of adhesion GPCR transcript variants assembled from publicly available deep-sequenced human samples. Nucleic Acids Res. 52, 3823-3836 (2024)
16.
Luzak, V.* et al.: SLAM-seq reveals independent contributions of RNA processing and stability to gene expression in African trypanosomes. Nucleic Acids Res., DOI: 10.1093/nar/gkae1203 (2024)
17.
Matsuda, A.* et al.: Despite the odds: Formation of the SARS-CoV-2 methylation complex. Nucleic Acids Res. 52, 6441-6458 (2024)
18.
Niedner, A. et al.: Intrinsically disordered RNA-binding motifs cooperate to catalyze RNA folding and drive phase separation. Nucleic Acids Res. 52, 14205-14228 (2024)
19.
Perez, G.* et al.: The UCSC Genome Browser database: 2025 update. Nucleic Acids Res., DOI: 10.1093/nar/gkae974 (2024)
20.
Raney, B.J.* et al.: The UCSC Genome Browser database: 2024 update. Nucleic Acids Res. 52, D1082-D1088 (2024)
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