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21.
Antonov, A.V. ; Dietmann, S. ; Rodchenkov, I. & Mewes, H.-W.: PPI spider: A tool for the interpretation of proteomics data in the context of protein-protein interaction networks. Proteomics 9, 2740-2749 (2009)
22.
Milosevic, J.* ; Bulau, P.* ; Mortz, E.* & Eickelberg, O.: Subcellular fractionation of TGF-β1-stimulated lung epithelial cells: A novel proteomic approach for identifying signaling intermediates. Proteomics 9, 1230-1240 (2009)
23.
Bode, M.* et al.: Interlocking transcriptomics, proteomics and toponomics technologies for brain tissue analysis in murine hippocampus. Proteomics 8, 1170-1178 (2008)
24.
Hamacher, M.* ; Herberg, F.* ; Ueffing, M. & Meyer, H.E.: Seven successful years of Omics research: The Human Brain Proteome Project within the National German Research Network (NGFN). Proteomics 8, 1116-1117 (2008)
25.
Hartl, D.* et al.: Transcriptome and proteome analysis of early embryonic mouse brain development. Proteomics 8, 1257-1265 (2008)
26.
Horsch, M. et al.: Systematic gene expression profiling of mouse model series reveals coexpressed genes. Proteomics 8, 1248-1256 (2008)
27.
Irmler, M. et al.: An approach to handling and interpretation of ambiguous data in transcriptome and proteome comparisons. Proteomics 8, 1165-1169 (2008)
28.
Schuchhardt, J.* et al.: BrainProfileDB - a platform for integration of functional genomics data. Proteomics 8, 1162-1164 (2008)
29.
Deeg, C.A.* et al.: Down-regulation of pigment epithelium-derived factor in uveitic lesion associates with focal vascular endothelial growth factor expression and breakdown of the blood-retinal barrier. Proteomics 7, 1540-1548 (2007)
30.
Gloeckner, C.J. ; Boldt, K. ; Schumacher, A. ; Roepman, R.* & Ueffing, M.: A novel tandem affinity purification strategy for the efficient isolation and characterisation of native protein complexes. Proteomics 7, 4228-4234 (2007)
31.
Hamacher, M.* et al.: High Performance Proteomics: 7th HUPO Brain Proteome Project Workshop. Proteomics 7, 2490-2496 (2007)
32.
Kiemer, L.* ; Costa, S. ; Ueffing, M. & Cesareni, G.*: WI-PHI: A weighted yeast interactome enriched for direct physical interactions. Proteomics 7, 932-943 (2007)
33.
Blazek, E. & Meisterernst, M.: A functional proteomics approach for the detection of nuclear proteins based on derepressed importin alpha. Proteomics 6, 2070-2078 (2006)
34.
Islinger, M.* ; Lüers, G.H.* ; Zischka, H. ; Ueffing, M. & Völkl, A.*: Insights into the membrane proteome of rat liver peroxisomes: Microsomal glutathione-S-transferase is shared by both subcellular compartments. Proteomics 6, 804-816 (2006)
35.
Sarioglu, H. et al.: Quantitative analysis of 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced proteome alterations in 5L rat hepatoma cells using isotope-coded protein lables. Proteomics 6, 2407-2421 (2006)
36.
Schmitt, S.* et al.: Proteome analysis of mitochondrial outer membrane from Neurospora crassa. Proteomics 6, 72-80 (2006)
37.
Facius, A. et al.: PRIME: A graphical interface for integrating genomic/proteomic databases. Proteomics 5, 76-80 (2005)
38.
Hauck, S.M. et al.: Proteomic analysis of the porcine interphotoreceptor matrix. Proteomics 5, 3623-3636 (2005)
39.
Klein, C.* et al.: The membrane proteome of Halobacterium salinarum. Proteomics 5, 180-197 (2005)
40.
Zischka, H. et al.: Improved mass spectrometric identification of gel-separated hydrophobic membrane proteins after sodium dodecyl sulfate removal by ion-pair extraction. Proteomics 4, 3776-3782 (2004)
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