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81.
Krumsiek, J. ; Arnold, R. & Rattei, T.*: Gepard: A rapid and sensitive tool for creating dotplots on genome scale. Bioinformatics 23, 1026-1028 (2007)
82.
Pagel, P. ; Oesterheld, M. ; Stuempflen, V. & Frishman, D.: The DIMA web resource-exploring the protein domain network. Bioinformatics 22, 997-998 (2006)
83.
Wang, Y. ; Hindemitt, T. & Mayer, K.F.X.: Significant sequence similarities in promoters and precursors of Arabidopsis thaliana non-conserved microRNAs. Bioinformatics 22, 2585-2589 (2006)
84.
Arnold, R. et al.: SIMAP - The similarity matrix of proteins. Bioinformatics 21, 42-46 (2005)
85.
Artamonova, I.I. ; Frishman, G. ; Gelfand, M.S.* & Frishman, D.: Mining sequence annotation databanks for association patterns. Bioinformatics 21, 3, 49-57 (2005)
86.
Friedel, C.C.* et al.: Support vector machines for separation of mixed plant-pathogen EST collections based on codon usage. Bioinformatics 21, 1383-1388 (2005)
87.
Hindemitt, T. & Mayer, K.F.X.: CREDO: A web-based tool for computational detection of conserved sequence motifs in noncoding sequences. Bioinformatics 21, 4304-4306 (2005)
88.
Pagel, P. et al.: The MIPS mammalian protein-protein interaction database. Bioinformatics 21, 832-834 (2005)
89.
Tetko, I.V. et al.: MIPS bacterial genomes functional annotation benchmark dataset. Bioinformatics 21, 2520-2521 (2005)
90.
Wahl, M.B. ; Heinzmann, U. & Imai, K.: LongSAGE analysis significantly improves genome annotation: identifications of novel genes and alternative transcripts in the mouse. Bioinformatics 21, 1393-1400 (2005)
91.
Wahl, M.B. ; Heinzmann, U. & Imai, K.: LongSAGE analysis revealed the presence of a large number of novel antisense genes in the mouse genome. Bioinformatics 21, 1389-1392 (2005)
92.
Antonov, A.V. ; Tetko, I.V. ; Mader, M.T. ; Budczies, J. & Mewes, H.-W.: Optimization models for cancer classification: Extracting gene interaction information from microarray expression data. Bioinformatics 20, 644-652 (2004)
93.
Antonov, A.V. ; Tetko, I.V. ; Prokopenko, V.V.* ; Kosykh, D. & Mewes, H.-W.: Web portal for classification of expression data using maximal margin linear programming. Bioinformatics 20, 3284-3285 (2004)
94.
Crass, T.* et al.: The Helmholtz network for bioinformatics: An integrative web portal bioinformatics resources. Bioinformatics 20, 268-270 (2004)
95.
Müller, J.C. & Andreoli, C.: Plotting haplotype-specific linkage disequilibrium patterns by extended haplotype homozygosity. Bioinformatics 19, 786-787 (2003)
96.
Wong, P.* ; Kolesov, G. ; Frishman, D. & Houry, W.A.*: Phylogenetic Web Profiler. Bioinformatics 19, 782-783 (2003)
97.
Burckhardt, F.: MOUSE (Mitochondrial and Other Useful SEquences) a compilation of population genetic markers. Bioinformatics 18, 890-891 (2002)
98.
Kolesov, G. ; Mewes, H.-W. & Frishman, D.: SNAPper : gene order predicts gene function. Bioinformatics 18, 1017-1019 (2002)
99.
Morgenstern, B. et al.: Exon discovery by genomic sequence alignment. Bioinformatics 18, 777-787 (2002)
100.
Frishman, D. et al.: Functional and structural genomics using PEDANT. Bioinformatics 17, 44-57 (2001)
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