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Gilly, A. ; Park, Y.C.* ; Png, G. ; Barysenska, A. ; Fischer, I. ; Bjørnland, T.* ; Southam, L. ; Suveges, D.* ; Neumeyer, S. ; Rayner, N.W. ; Tsafantakis, E.* ; Karaleftheri, M.* ; Dedoussis, G.* ; Zeggini, E.

Whole-genome sequencing analysis of the cardiometabolic proteome.

Nat. Commun. 11:6336 (2020)
Verlagsversion DOI PMC
Open Access Gold
Creative Commons Lizenzvertrag
The human proteome is a crucial intermediate between complex diseases and their genetic and environmental components, and an important source of drug development targets and biomarkers. Here, we comprehensively assess the genetic architecture of 257 circulating protein biomarkers of cardiometabolic relevance through high-depth (22.5×) whole-genome sequencing (WGS) in 1328 individuals. We discover 131 independent sequence variant associations (P < 7.45 × 10-11) across the allele frequency spectrum, all of which replicate in an independent cohort (n = 1605, 18.4x WGS). We identify for the first time replicating evidence for rare-variant cis-acting protein quantitative trait loci for five genes, involving both coding and noncoding variation. We construct and validate polygenic scores that explain up to 45% of protein level variation. We find causal links between protein levels and disease risk, identifying high-value biomarkers and drug development targets.
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Publikationstyp Artikel: Journalartikel
Dokumenttyp Wissenschaftlicher Artikel
Schlagwörter Genetic Architecture; Receptor; Identification; Chemokines; Expression; Framework; Proteins; Samples; Complex; Antigen
Sprache englisch
Veröffentlichungsjahr 2020
HGF-Berichtsjahr 2020
ISSN (print) / ISBN 2041-1723
e-ISSN 2041-1723
Zeitschrift Nature Communications
Quellenangaben Band: 11, Heft: 1, Seiten: , Artikelnummer: 6336 Supplement: ,
Verlag Nature Publishing Group
Verlagsort London
Begutachtungsstatus Peer reviewed
Institut(e) Institute of Translational Genomics (ITG)
POF Topic(s) 30205 - Bioengineering and Digital Health
Forschungsfeld(er) Genetics and Epidemiology
PSP-Element(e) G-506700-001
Förderungen Projekt DEAL
DOI 10.1038/s41467-020-20079-2
WOS ID WOS:000599795600015
Scopus ID 85097381511
PubMed ID 33303764
Erfassungsdatum 2020-12-16
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