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PhenomiR: MicroRNAs in human diseases and biological processes.
Methods Mol. Biol. 822, 249-260 (2012)
The association of dysregulated microRNAs (miRNAs) and diseases has been shown in a variety of studies. Here, we review a resource denoted as PhenomiR, providing systematic and comprehensive access to such studies. It allows machine-readable access to miRNA and target relations from these studies to study the impact of miRNAs on multifactorial diseases across many samples and biological replicates. We summarize the PhenomiR data structure and its content and show how to access the database and use it in everyday miRNA profile analysis using the R language.
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Publication type
Article: Journal article
Document type
Scientific Article
Editors
Fan, J.-B.*
Keywords
MicroRNA; Database; Disease; Bioprocess
ISSN (print) / ISBN
1064-3745
e-ISSN
1940-6029
Conference Title
Next-Generation MicroRNA Expression Profiling Technology
Journal
Methods in Molecular Biology
Quellenangaben
Volume: 822,
Pages: 249-260
Series
Methods in Molecular Biology
Publisher
Springer
Publishing Place
Berlin [u.a.]
Non-patent literature
Publications
Reviewing status
Peer reviewed