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Tetko, I.V. ; Jaroszewicz, I.* ; Platts, J.A.* ; Kuduk-Jaworska, J.*

Calculation of lipophilicity for Pt(II) complexes: Experimental comparison of several methods.

J. Inorg. Biochem. 102, 1424-1437 (2008)
DOI
Open Access Green as soon as Postprint is submitted to ZB.
Platinum containing compounds are promising antitumor agents, but must enter cells before reaching their main biological target, namely DNA. Their distribution within the body, and hence their activity is to a large extent determined by their lipophilicity, thus there is a strong interest to develop computational methods to predict this important property. This study analyses accuracy of five methods, namely ALOGPS, KOWWIN, CLOGP and two quantum chemical approaches, to predict octanol/water partition coefficients (logP) for sets of 43 and 12 Pt(II) complexes, collected from the literature and measured by the authors, respectively. All methods gave generally poor results with mean absolute error (MAE) of between 0.8 and 3 log units for prediction of new compounds. Extension of the ALOGPS program with data from the literature set resulted in the best prediction ability, MAE=0.46, for the measured molecules. The program was also able to correctly predict errors in calculated logP values. It is freely available for interactive use at http://www.vcclab.org.
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Publication type Article: Journal article
Document type Scientific Article
Corresponding Author
Keywords Log Po/w; Partition coefficient; Lipophilicity; Platinum complexes; QSPR
ISSN (print) / ISBN 0162-0134
e-ISSN 0162-0134
Journal Journal of Inorganic Biochemistry
Quellenangaben Volume: 102, Issue: 7, Pages: 1424-1437 Article Number: , Supplement: ,
Publisher Elsevier
Non-patent literature Publications
Reviewing status Peer reviewed
Institute(s) Institute of Bioinformatics and Systems Biology (IBIS)