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Haesler, F. ; Hagn, A. ; Engel, M. ; Schloter, M.

Impact of elevated atmospheric O3 on the actinobacterial community structure and function in the rhizosphere of European beech (Fagus sylvatica L.).

Front. Microbiol. 5:36 (2014)
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Many bacteria belonging to the phylum of Actinobacteria are known as antagonists against phytpathogenic microbes. This study aimed to analyze the effect of ozone on the actinobacterial community of the rhizosphere of four years old European beech (Fagus sylvatica L.) trees during different time points of the vegetation period. Effects of ozone on the total community structure of Actinobacteria were studied based on the analysis of 16S rRNA gene amplicons. In addition effects of the ozone treatment on the diversity of potential biocontrol active Actionobacteria being able to produce antibiotics were characterized by using the type II polyketide synthases (PKS) genes as marker. Season as well as ozone treatments had a significant effect on parts of the actinobacterial rhizosphere community of European beech. However on the basis of the performed analysis, the diversity of Actinobacteria possessing type II PKS genes is neither affected by seasonal changes nor by the ozone treatments, indicating no influence of the investigated treatments on the biocontrol active part of the actinobacterial community.
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Publication type Article: Journal article
Document type Scientific Article
Corresponding Author
Keywords Actinobacteria ; European Beech ; Biocontrol ; Ozone ; Polyketide Synthase Gene; Polyketide Synthase Genes; Phytophthora-citricola; Ozone; Soil; Actinomycete; Forest; Plants; Trees; Co2; Fingerprints
ISSN (print) / ISBN 1664-302X
e-ISSN 1664-302X
Journal Frontiers in Microbiology
Quellenangaben Volume: 5, Issue: , Pages: , Article Number: 36 Supplement: ,
Publisher Frontiers
Publishing Place Lausanne
Non-patent literature Publications
Reviewing status Peer reviewed
Institute(s) Research Unit Comparative Microbiome Analysis (COMI)