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Open Access Green as soon as Postprint is submitted to ZB.
Second-order source separation based on prior knowledge realized in a graph model.
In: Proceedings (Latent variable analysis and signal separation : 9th international conference, 27-30 September 2010, St. Malo, France). Berlin [u.a.]: Springer, 2010. 434-441 (Lect. Notes Comput. Sc. ; 6365)
Matrix factorization techniques provide efficient tools for the detailed analysis of large-scale biological and biomedical data. While underlying algorithms usually work fully blindly, we propose to incorporate prior knowledge encoded in a graph model. This graph introduces a partial ordering in data without intrinsic (e.g. temporal or spatial) structure, which allows the definition of a graph-autocorrelation function. Using this framework as constraint to the matrix factorization task we develop a second-order source separation algorithm called graph-decorrelation algorithm (GraDe). We demonstrate its applicability and robustness by analyzing microarray data from a stem cell differentiation experiment.
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Publication type
Article: Conference contribution
Editors
Vigneron, V.* ; Zarzoso, V.* ; Moreau, E.*
ISSN (print) / ISBN
0302-9743
e-ISSN
1611-3349
ISBN
364215994X
Conference Title
Latent variable analysis and signal separation : 9th international conference
Conference Date
27-30 September 2010
Conference Location
St. Malo, France
Proceedings Title
Proceedings
Quellenangaben
Volume: 6365,
Pages: 434-441
Publisher
Springer
Publishing Place
Berlin [u.a.]
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