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Iron and FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (FIT)-dependent regulation of proteins and genes in Arabidopsis thaliana roots.
Proteomics 15, 3030-3047 (2015)
Iron is an essential micronutrient for plants, and iron deficiency requires a variety of physiological adaptations. FIT (FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR) is essential for the regulation of iron uptake in Arabidopsis thaliana roots. FIT is transcriptionally as well as post-transcriptionally regulated in response to iron supply. To investigate to which extent post-transcriptional regulation upon iron deficiency applies to proteins and to determine the dependency on FIT, we performed a parallel proteomic and transcriptomic study with wild-type, a fit knock-out mutant and a FIT over-expressing Arabidopsis line. Among 92 proteins differentially regulated by iron and/or FIT, we identified 30 proteins, which displayed differential regulation at the transcriptional level. 11 protein spots were regulated in at least one of the data points even contrary to the respective genes dependent on FIT. We found 10 proteins in at least two forms. The analysis of functional classification showed enriched Gene Ontology (GO) terms among the post-transcriptionally regulated genes and of proteins, that were down-regulated or absent in the fit knock-out mutant. Taken together, we provide evidence for iron and FIT-dependent post-transcriptional regulation in iron homeostasis in A. thaliana.
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Publication type
Article: Journal article
Document type
Scientific Article
Keywords
Arabidopsis, Fit ; Iron ; Post-transcriptional Regulation ; Proteome ; Transcription
Language
english
Publication Year
2015
HGF-reported in Year
2015
ISSN (print) / ISBN
1615-9853
e-ISSN
1615-9861
Journal
Proteomics
Quellenangaben
Volume: 15,
Issue: 17,
Pages: 3030-3047
Publisher
Wiley
Reviewing status
Peer reviewed
Institute(s)
Research Unit Environmental Simulation (EUS)
Institute of Biochemical Plant Pathology (BIOP)
CF Metabolomics & Proteomics (CF-MPC)
Institute of Biochemical Plant Pathology (BIOP)
CF Metabolomics & Proteomics (CF-MPC)
POF-Topic(s)
30202 - Environmental Health
20402 - Sustainable Plant Production
30203 - Molecular Targets and Therapies
20402 - Sustainable Plant Production
30203 - Molecular Targets and Therapies
Research field(s)
Environmental Sciences
Enabling and Novel Technologies
Enabling and Novel Technologies
PSP Element(s)
G-504900-002
G-504900-003
G-505700-001
G-504900-003
G-505700-001
PubMed ID
25951126
WOS ID
WOS:000360965900015
Scopus ID
84940595265
Scopus ID
84931095668
Erfassungsdatum
2015-06-03