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Eraslan, G. ; Avsec, Ž.* ; Gagneur, J.* ; Theis, F.J.

Deep learning: New computational modelling techniques for genomics.

Nat. Rev. Genet. 20, 389-403 (2019)
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As a data-driven science, genomics largely utilizes machine learning to capture dependencies in data and derive novel biological hypotheses. However, the ability to extract new insights from the exponentially increasing volume of genomics data requires more expressive machine learning models. By effectively leveraging large data sets, deep learning has transformed fields such as computer vision and natural language processing. Now, it is becoming the method of choice for many genomics modelling tasks, including predicting the impact of genetic variation on gene regulatory mechanisms such as DNA accessibility and splicing.
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Publication type Article: Journal article
Document type Review
Keywords Neural-networks; Chip-seq; Dna; Prediction; Gene; Classification; Cancer; Sites
Language english
Publication Year 2019
HGF-reported in Year 2019
ISSN (print) / ISBN 1471-0056
e-ISSN 1471-0064
Quellenangaben Volume: 20, Issue: 7, Pages: 389-403 Article Number: , Supplement: ,
Publisher Nature Publishing Group
Publishing Place Macmillan Building, 4 Crinan St, London N1 9xw, England
Reviewing status Peer reviewed
POF-Topic(s) 30205 - Bioengineering and Digital Health
Research field(s) Enabling and Novel Technologies
PSP Element(s) G-503800-001
Scopus ID 85064253268
PubMed ID 30971806
Erfassungsdatum 2019-04-24