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X chromosome genetic data in a Spanish children cohort, dataset description and analysis pipeline.
Sci. Data 6:130 (2019)
X chromosome genetic variation has been proposed as a potential source of missing heritability for many complex diseases, including obesity. Currently, there is a lack of public available genetic datasets incorporating X chromosome genotype data. Although several X chromosome-specific statistics have been developed, there is also a lack of readily available implementations for routine analysis. Here, we aimed: (1) to make public and describe a dataset incorporating phenotype and X chromosome genotype data from a cohort of 915 normal-weight, overweight and obese children, and (2) to deeply describe a whole implementation of the special X chromosome analytic process in genetics. Datasets and pipelines like this are crucial to get familiar with the steps in which X chromosome requires special attention and may raise awareness of the importance of this genomic region.
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Publication type
Article: Journal article
Document type
Scientific Article
Keywords
Genome-wide Association; Dna Methylation; Inactivation; Expression; Obesity; Tests; Overweight; Landscape; Markers; Weight
ISSN (print) / ISBN
2052-4463
e-ISSN
2052-4463
Journal
Scientific Data
Quellenangaben
Volume: 6,
Issue: 1,
Article Number: 130
Publisher
Nature Publishing Group
Publishing Place
London
Non-patent literature
Publications
Reviewing status
Peer reviewed
Institute(s)
Institute of Diabetes and Obesity (IDO)