Weiß, M. ; Chanou, A. ; Schauer, T. ; Tvardovskiy, A. ; Meiser, S. ; König, A.-C. ; Schmidt, T. ; Kruse, E. ; Ummethum, H. ; Trauner, M. ; Werner, M. ; Lalonde, M. ; Hauck, S.M. ; Scialdone, A. ; Hamperl, S.
Single-copy locus proteomics of early- and late-firing DNA replication origins identifies a role of Ask1/DASH complex in replication timing control.
Cell Rep. 42:112045 (2023)
The chromatin environment at origins of replication is thought to influence DNA replication initiation in eukaryotic genomes. However, it remains unclear how and which chromatin features control the firing of early-efficient (EE) or late-inefficient (LI) origins. Here, we use site-specific recombination and single-locus chromatin isolation to purify EE and LI replication origins in Saccharomyces cerevisiae. Using mass spectrometry, we define the protein composition of native chromatin regions surrounding the EE and LI replication start sites. In addition to known origin interactors, we find the microtubule-binding Ask1/DASH complex as an origin-regulating factor. Strikingly, tethering of Ask1 to individual origin sites advances replication timing (RT) of the targeted chromosomal domain. Targeted degradation of Ask1 globally changes RT of a subset of origins, which can be reproduced by inhibiting microtubule dynamics. Thus, our findings mechanistically connect RT and chromosomal organization via Ask1/DASH with the microtubule cytoskeleton.
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Publication type
Article: Journal article
Document type
Scientific Article
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Keywords
Ask1 Protein ; Cp: Molecular Biology ; Dash Complex ; Dna Replication Origin ; Affinity Purification ; Locus-specific Chromatin Isolation ; Microtubule Cytoskeleton ; Origin Chromatin Structure ; Replication Efficiency ; Replication Timing ; Site-specific Recombination; Kinetochore-microtubule Interface; Yeast; Chromatin; Binding; Recognition; Activation; Initiation; Sequence; Dynamics; Time
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Language
english
Publication Year
2023
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0
HGF-reported in Year
2023
ISSN (print) / ISBN
2211-1247
e-ISSN
2211-1247
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Volume: 42,
Issue: 2,
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Article Number: 112045
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Cell Press
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50 Hampshire St, Floor 5, Cambridge, Ma 02139 Usa
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Peer reviewed
POF-Topic(s)
30204 - Cell Programming and Repair
30203 - Molecular Targets and Therapies
30205 - Bioengineering and Digital Health
Research field(s)
Stem Cell and Neuroscience
Helmholtz Diabetes Center
Enabling and Novel Technologies
PSP Element(s)
G-554500-001
G-506200-001
G-502800-001
G-506290-001
G-505700-001
G-502899-701
G-503800-001
A-630700-001
Grants
Helmholtz Gesellschaft
European Research Council (ERC starting grant)
DFG
Copyright
Erfassungsdatum
2023-02-01