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Theissinger, K.* ; Fernandes, C.* ; Formenti, G.* ; Bista, I.* ; Berg, P.R.* ; Bleidorn, C.* ; Bombarely, A.* ; Crottini, A.* ; Gallo, G.R.* ; Godoy, J.A.* ; Jentoft, S.* ; Malukiewicz, J.* ; Mouton, A.* ; Oomen, R.A.* ; Paez, S.* ; Palsbøll, P.J.* ; Pampoulie, C.* ; Ruiz-López, M.J.* ; Secomandi, S.* ; Svardal, H.* ; Theofanopoulou, C.* ; de Vries, J.* ; Waldvogel, A.M.* ; Zhang, G.* ; Jarvis, E.D.* ; Bálint, M.* ; Ciofi, C.* ; Waterhouse, R.M.* ; Mazzoni, C.J.* ; Höglund, J.* ; European Reference Genome Atlas Consortium (Urban, L.)

How genomics can help biodiversity conservation.

Trends Genet. 39, 545-559 (2023)
Publ. Version/Full Text DOI PMC
Open Access Hybrid
Creative Commons Lizenzvertrag
The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics.
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Publication type Article: Journal article
Document type Review
Keywords Anthropocene ; European Reference Genome Atlas (erga) ; Biodiversity Genomics ; Conservation Applications ; Genomic Toolbox ; Reference Genomes
Language english
Publication Year 2023
HGF-reported in Year 2023
ISSN (print) / ISBN 0168-9479
Journal Trends in Genetics
Quellenangaben Volume: 39, Issue: 7, Pages: 545-559 Article Number: , Supplement: ,
Publisher Elsevier
Reviewing status Peer reviewed
Institute(s) Helmholtz Artifical Intelligence Cooperation Unit (HAICU)
Helmholtz Pioneer Campus (HPC)
POF-Topic(s) 30205 - Bioengineering and Digital Health
Research field(s) Enabling and Novel Technologies
Pioneer Campus
PSP Element(s) G-530013-001
G-510011-001
DOI 10.1016/j.tig.2023.01.005
PubMed ID 36801111
Erfassungsdatum 2023-10-06
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