PuSH - Publication Server of Helmholtz Zentrum München

Export: TXT Text RIS Endnote (RIS) BIB BibTeX
Seep, L.* ; Grein, S.* ; Splichalova, I.* ; Ran, D.* ; Mikhael, M.* ; Hildebrand, S.* ; Lauterbach, M.* ; Hiller, K.* ; Ribeiro, D.J.S.* ; Sieckmann, K.* ; Kardinal, R.* ; Huang, H.* ; Yu, J.* ; Kallabis, S.* ; Behrens, J.* ; Till, A.* ; Peeva, V.* ; Strohmeyer, A.* ; Bruder, J.* ; Blum, T.* ; Soriano-Arroquia, A.* ; Tischer, D.* ; Kuellmer, K.* ; Li, Y.* ; Beyer, M.* ; Gellner, A.K.* ; Fromme, T.* ; Wackerhage, H.* ; Klingenspor, M.* ; Fenske, W.K.* ; Scheja, L.* ; Meissner, F.* ; Schlitzer, A.* ; Mass, E.* ; Wachten, D.* ; Latz, E.* ; Pfeifer, A.* ; Hasenauer, J.

From planning stage towards FAIR data: A practical metadatasheet for biomedical scientists.

Sci. Data 11:524 (2024)
Publ. Version/Full Text DOI PMC
Open Access Gold
Creative Commons Lizenzvertrag
Datasets consist of measurement data and metadata. Metadata provides context, essential for understanding and (re-)using data. Various metadata standards exist for different methods, systems and contexts. However, relevant information resides at differing stages across the data-lifecycle. Often, this information is defined and standardized only at publication stage, which can lead to data loss and workload increase. In this study, we developed Metadatasheet, a metadata standard based on interviews with members of two biomedical consortia and systematic screening of data repositories. It aligns with the data-lifecycle allowing synchronous metadata recording within Microsoft Excel, a widespread data recording software. Additionally, we provide an implementation, the Metadata Workbook, that offers user-friendly features like automation, dynamic adaption, metadata integrity checks, and export options for various metadata standards. By design and due to its extensive documentation, the proposed metadata standard simplifies recording and structuring of metadata for biomedical scientists, promoting practicality and convenience in data management. This framework can accelerate scientific progress by enhancing collaboration and knowledge transfer throughout the intermediate steps of data creation.
Impact Factor
Scopus SNIP
Altmetric
5.800
0.000
Tags
Annotations
Special Publikation
Hide on homepage

Edit extra information
Edit own tags
Private
Edit own annotation
Private
Hide on publication lists
on hompage
Mark as special
publikation
Publication type Article: Journal article
Document type Scientific Article
Keywords Annotation; Curation; Geo
Language english
Publication Year 2024
HGF-reported in Year 2024
ISSN (print) / ISBN 2052-4463
e-ISSN 2052-4463
Journal Scientific Data
Quellenangaben Volume: 11, Issue: 1, Pages: , Article Number: 524 Supplement: ,
Publisher Nature Publishing Group
Publishing Place London
Reviewing status Peer reviewed
Institute(s) Institute of Computational Biology (ICB)
POF-Topic(s) 30205 - Bioengineering and Digital Health
Research field(s) Enabling and Novel Technologies
PSP Element(s) G-553800-001
Grants Medical Faculty, University of Bonn, BONFOR
Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy
University of Bonn
European Research Council (ERC) under the European Union
DFG
European Research Council (ERC, under the European Union's Horizon Europe research and innovation program)
Gabriele Hedwig Danielewski foundation
Else Kroener Fresenius Foundation
Deutsche Forschungsgemeinschaft (German Research Foundation)
DOI 10.1038/s41597-024-03349-2
WOS ID 001229403000003
Scopus ID 85194018952
PubMed ID 38778016
Erfassungsdatum 2024-06-14
[➜Report correction]