Cayir, A.* ; Tannæs, T.M.* ; Saeed, S.* ; Blüher, M. ; Böttcher, Y.*
Protocol for chromatin immunoprecipitation of histone modifications in frozen adipose tissue.
STAR Protoc. 5:103163 (2024)
Chromatin immunoprecipitation (ChIP) combined with sequencing has revolutionized our understanding of gene regulation; however, its application to frozen adipose tissue presents unique challenges due to the high levels of lipid content. Here, we present a protocol for ChIP of histone modifications in human frozen adipose tissue. We describe steps for tissue preparation, chromatin isolation, sonication, pre-clearing of chromatin, and immunoprecipitation. We then detail procedures for elution, crosslink reversal, chromatin purification, quality control, and library synthesis.
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Publication type
Article: Journal article
Document type
Scientific Article
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Keywords
Chromatin Immunoprecipitation (chip) ; Health Sciences
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Language
english
Publication Year
2024
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0
HGF-reported in Year
2024
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2666-1667
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Volume: 5,
Issue: 3,
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Article Number: 103163
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Elsevier
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Radarweg 29, 1043 Nx Amsterdam, Netherlands
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Peer reviewed
Institute(s)
Helmholtz Institute for Metabolism, Obesity and Vascular Research (HI-MAG)
POF-Topic(s)
30201 - Metabolic Health
Research field(s)
Helmholtz Diabetes Center
PSP Element(s)
G-506501-001
Grants
Helse Sr-st
Copyright
Erfassungsdatum
2024-07-23