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Lenzen, B.* ; Rösch, F.* ; Legen, J.* ; Ruwe, H.* ; Kachariya, N. ; Sattler, M. ; Small, I.* ; Schmitz-Linneweber, C.*

The chloroplast RNA-binding protein CP29A supports rbcL expression during cold acclimation.

Proc. Natl. Acad. Sci. U.S.A. 122:e2403969122 (2025)
Publ. Version/Full Text Research data DOI PMC
Open Access Gold (Paid Option)
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The chloroplast genome encodes key components of the photosynthetic light reaction machinery as well as the large subunit of the enzyme central for carbon fixation, Ribulose-1,5-bisphosphat-carboxylase/-oxygenase (RuBisCo). Its expression is predominantly regulated posttranscriptionally, with nuclear-encoded RNA-binding proteins (RBPs) playing a key role. Mutants of chloroplast gene expression factors often exhibit impaired chloroplast biogenesis, especially in cold conditions. Low temperatures pose a challenge for plants as this leads to electron imbalances and oxidative damage. A well-known response of plants to this problem is to increase the production of RuBisCo and other Calvin Cycle enzymes in the cold, but how this is achieved is unclear. The chloroplast RBP CP29A has been shown to be essential for cold resistance in growing leaf tissue of Arabidopsis thaliana. Here, we examined CP29A-RNA interaction sites at nucleotide resolution. We found that CP29A preferentially binds to the 5'-untranslated region of rbcL, downstream of the binding site of the pentatricopeptide repeat protein MATURATION OF RBCL 1 (MRL1). MRL1 is an RBP known to be necessary for the accumulation of rbcL. In Arabidopsis mutants lacking CP29A, we were unable to observe significant effects on rbcL, possibly due to CP29A's restricted role in a limited number of cells at the base of leaves. In contrast, CRISPR/Cas9-induced mutants of tobacco NtCP29A exhibit cold-dependent photosynthetic deficiencies throughout the entire leaf blade. This is associated with a parallel reduction in rbcL mRNA and RbcL protein accumulation. Our work indicates that a chloroplast RNA-binding protein contributes to cold acclimation of RbcL production.
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Publication type Article: Journal article
Document type Scientific Article
Corresponding Author
Keywords Clip ; Rna Binding ; Rubisco ; Chloroplast ; Cold Acclimation; Pentatricopeptide Repeat Protein; Rubisco Large-subunit; Genome-wide Analysis; Messenger-rna; Carbon Metabolism; Leaves; Ribonucleoproteins; Reveals; Enzymes; Stabilization
ISSN (print) / ISBN 0027-8424
e-ISSN 1091-6490
Quellenangaben Volume: 122, Issue: 5, Pages: , Article Number: e2403969122 Supplement: ,
Publisher National Academy of Sciences
Publishing Place 2101 Constitution Ave Nw, Washington, Dc 20418 Usa
Non-patent literature Publications
Reviewing status Peer reviewed