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Henneman, N.F.* ; Kawamura, G.* ; Luo, Y.* ; Dias, C.O.* ; Su, J.* ; Segaloni, A.* ; Nemazanyy, I.* ; Cam, S.L.* ; Rodrigues, C.* ; Kuperwasser, N.* ; Cagnard, N.* ; Hnia, K.* ; Margueron, R.* ; Lutter, D. ; Ozawa, T.* ; Panasyuk, G.*

Nuclear class 3 PI3K co-activates fasting-specific chromatin remodelling.

Nat. Cell Biol., 42 (2026)
Publ. Version/Full Text DOI PMC
Open Access Hybrid
Creative Commons Lizenzvertrag
Transcriptional remodelling during fasting ensures metabolic adaptation and provides health benefits across species. Although several regulators of fasting-induced transcription and chromatin are known, how nutrient levels directly influence RNA polymerase II (RNAPII) and epigenetic writers remains unclear. Here we show that lipid kinase class 3 phosphatidylinositol 3-kinase (PI3K-3), a master regulator of autophagy, also functions on chromatin as a co-activator of epigenetic writers to promote RNAPII transcription. PI3K-3 overlaps with transcriptionally engaged RNAPII phosphorylated at Ser5 and with Setd1a/COMPASS, the complex that deposits the activating H3K4me3 mark. Nuclear PI3K-3 interacts with RNAPII and Setd1a/COMPASS and promotes their chromatin binding. PI3K-3 loss reduces RNAPII-S5p and H3K4me3 at selected genes, whereas PI3K-3 overexpression co-activates p300/CBP and chromatin-targeted PI3K-3 increases H3K4me3. During starvation, PI3K-3 induces autophagy genes and drives fasted liver towards ketogenesis and lipid degradation. These findings link nutrient stress to chromatin-mediated transcriptional activation.
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Publication type Article: Journal article
Document type Scientific Article
Keywords Chromatin ; H3k4me3 ; Epigenetics ; Rna Polymerase Ii ; Transcriptional Regulation ; Transcription (linguistics) ; Regulator ; Phosphatidylinositol ; Pi3k/akt/mtor Pathway; Rna-polymerase; Phosphatidylinositol 3-kinase; Transcriptional Elongation; Epigenetic Regulation; Methylation; Complexes; Autophagy; Inhibition; Expression
ISSN (print) / ISBN 1465-7392
e-ISSN 1476-4679
Quellenangaben Volume: , Issue: , Pages: 42 Article Number: , Supplement: ,
Publisher Nature Publishing Group
Publishing Place Heidelberger Platz 3, Berlin, 14197, Germany
Reviewing status Peer reviewed
Grants Deutsche Forschungsgemeinschaft (German Research Foundation)
EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council)