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Wägele, B. ; Dunger-Kaltenbach, I. ; Fobo, G. ; Montrone, C. ; Mewes, H.-W. ; Ruepp, A.

CRONOS: The cross-reference navigation server.

Bioinformatics 25, 141-143 (2009)
Verlagsversion Volltext DOI PMC
Open Access Gold
Cross-mapping of gene and protein identifiers between different databases is a tedious and time-consuming task. To overcome this, we developed CRONOS, a cross-reference server that contains entries from five mammalian organisms presented by major gene and protein information resources. Sequence similarity analysis of the mapped entries shows that the cross-references are highly accurate. In total, up to 18 different identifier types can be used for identification of cross-references. The quality of the mapping could be improved substantially by exclusion of ambiguous gene and protein names which were manually validated. Organism-specific lists of ambiguous terms, which are valuable for a variety of bioinformatics applications like text mining are available for download.
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Publikationstyp Artikel: Journalartikel
Dokumenttyp Wissenschaftlicher Artikel
Schlagwörter IDENTIFIERS; GENE
Sprache englisch
Veröffentlichungsjahr 2009
HGF-Berichtsjahr 2008
e-ISSN 1367-4811
Zeitschrift Bioinformatics
Quellenangaben Band: 25, Heft: 1, Seiten: 141-143 Artikelnummer: , Supplement: ,
Verlag Oxford University Press
Verlagsort Oxford
Begutachtungsstatus Peer reviewed
Institut(e) Institute of Bioinformatics and Systems Biology (IBIS)
POF Topic(s) 30505 - New Technologies for Biomedical Discoveries
Forschungsfeld(er) Enabling and Novel Technologies
PSP-Element(e) G-503700-001
PubMed ID 19010804
DOI 10.1093/bioinformatics/btn590
WOS ID WOS:000261996400028
Scopus ID 58049218991
Erfassungsdatum 2008-12-31
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