PuSH - Publikationsserver des Helmholtz Zentrums München: Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes.

Informationen

Hinweise zu Qualitätskriterien von Zeitschriften

Open-Access-Richtlinie der Helmholtz-Gemeinschaft 2016

CC Licencences

Metriken für Publikationen

Navigation

Startseite

English

EVA: Veröffentlichen

Neuer EVA Antrag

Recherche

Erweiterte Suche

Durchblättern nach ...

... HMGU-Autoren/Konsortien

... Organisationsstruktur

... Zeitschriften

... Publikationstypen

... Forschungsdaten

... Arbeitsgruppen

... Erscheinungsjahr

Publikationen im Überblick

Statistik

HGF Fortschrittsbericht

OA Publikationen

Eintragen

Neue Publikation eintragen

Neue Publikation holen aus...

...EVA

Fehlende Publikation melden

Highlights

Suche

Hilfe & Kontakt

Ansprechpartner

Hilfe

Datenschutz

Helmholtz Open Science

Bibliometrische Indikatoren

SHERPA/RoMEO

DOAJ

Export:

Text

Endnote (RIS) BIB

BibTeX

Cannon, S.B.* ; Sterck, L.* ; Rombauts, S.* ; Sato, S.* ; Cheung, F.* ; Gouzy, J.* ; Wang, X.* ; Mudge, J.* ; Vasdewani, J.* ; Schiex, T.* ; Spannagl, M. ; Monaghan, E.* ; Nicholson, C.* ; Humphray, S.J.* ; Schoof, H.* ; Mayer, K.F.X. ; Rogers, J.* ; Quétier, F.* ; Oldroyd, G.E.* ; Debellé, F.* ; Cook, D.R.* ; Retzel, E.F.* ; Roe, B.A.* ; Town, C.D.* ; Tabata, S.* ; van de Peer, Y.* ; Young, N.D.*

Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes.

Proc. Natl. Acad. Sci. U.S.A. 103, 14959-14964 (2006)

Verlagsversion Volltext

DOI

PMC

	Open Access Gold

Abstract
Metriken
Zusatzinfos

Genome sequencing of the model legumes, Medicago truncatula and Lotus japonicus, provides an opportunity for large-scale sequence-based comparison of two genomes in the same plant family. Here we report synteny comparisons between these species, including details about chromosome relationships, large-scale synteny blocks, microsynteny within blocks, and genome regions lacking clear correspondence. The Lotus and Medicago genomes share a minimum of 10 large-scale synteny blocks, each with substantial collinearity and frequently extending the length of whole chromosome arms. The proportion of genes syntenic and collinear within each synteny block is relatively homogeneous. Medicago-Lotus comparisons also indicate similar and largely homogeneous gene densities, although gene-containing regions in Mt occupy 20-30% more space than Lj counterparts, primarily because of larger numbers of Mt retrotransposons. Because the interpretation of genome comparisons is complicated by large-scale genome duplications, we describe synteny, synonymous substitutions and phylogenetic analyses to identify and date a probable whole-genome duplication event. There is no direct evidence for any recent large-scale genome duplication in either Medicago or Lotus but instead a duplication predating speciation. Phylogenetic comparisons place this duplication within the Rosid I clade, clearly after the split between legumes and Salicaceae (poplar).

Impact Factor

Scopus SNIP

Web of Science
Times Cited

Scopus
Cited By

Altmetric

10.231

0.000

226

241