Hara, K.* ; Fujita, H.* ; Johnson, T.A.* ; Yamauchi, T.* ; Yasuda, K.* ; Horikoshi, M.* ; Peng, C.* ; Hu, C.* ; Ma, R.C.* ; Imamura, M.* ; Iwata, M.* ; Tsunoda, T.* ; Morizono, T.* ; Shojima, N.* ; So, W.Y.* ; Leung, T.F.* ; Kwan, P.* ; Zhang, R.* ; Wang, J.* ; Yu, W.* ; Maegawa, H.* ; Hirose, H.* ; DIAGRAM Consortium (Huth, C. ; Gieger, C. ; Klopp, N. ; Meitinger, T. ; Illig, T. ; Grallert, H. ; Thorand, B. ; Wichmann, H.-E. ; Petersen, A.-K.) ; Kaku, K.* ; Ito, C.* ; Watada, H.* ; Tanaka, Y.* ; Tobe, K.* ; Kashiwagi, A.* ; Kawamori, R.* ; Jia, W.* ; Chan, J.C.* ; Teo, Y.Y.* ; Shyong, T.E.* ; Kamatani, N.* ; Kubo, M.* ; Maeda, S.* ; Kadowaki, T.*
Genome-wide association study identifies three novel loci for type 2 diabetes.
Hum. Mol. Genet. 23, 239-246 (2014)
Although over 60 loci for type 2 diabetes (T2D) have been identified, there still remains a large genetic component to be clarified. To explore unidentified loci for T2D, we performed a genome-wide association study (GWAS) of 6 209 637 single-nucleotide polymorphisms (SNPs), which were directly genotyped or imputed using East Asian references from the 1000 Genomes Project (June 2011 release) in 5976 Japanese patients with T2D and 20 829 nondiabetic individuals. Nineteen unreported loci were selected and taken forward to follow-up analyses. Combined discovery and follow-up analyses (30 392 cases and 34 814 controls) identified three new loci with genome-wide significance, which were MIR129-LEP [rs791595; risk allele = A; risk allele frequency (RAF) = 0.080; P = 2.55 × 10(-13); odds ratio (OR) = 1.17], GPSM1 [rs11787792; risk allele = A; RAF = 0.874; P = 1.74 × 10(-10); OR = 1.15] and SLC16A13 (rs312457; risk allele = G; RAF = 0.078; P = 7.69 × 10(-13); OR = 1.20). This study demonstrates that GWASs based on the imputation of genotypes using modern reference haplotypes such as that from the 1000 Genomes Project data can assist in identification of new loci for common diseases.
Impact Factor
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Times Cited
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Cited By
Altmetric
Publikationstyp
Artikel: Journalartikel
Dokumenttyp
Wissenschaftlicher Artikel
Typ der Hochschulschrift
Herausgeber
Schlagwörter
East-asian Populations; Susceptibility Loci; Insulin-resistance; Beta-cell; Variants; Transporters; Metaanalysis; Mellitus; Diseases; Obesity
Keywords plus
Sprache
englisch
Veröffentlichungsjahr
2014
Prepublished im Jahr
2013
HGF-Berichtsjahr
2013
ISSN (print) / ISBN
0964-6906
e-ISSN
1460-2083
ISBN
Bandtitel
Konferenztitel
Konferzenzdatum
Konferenzort
Konferenzband
Quellenangaben
Band: 23,
Heft: 1,
Seiten: 239-246
Artikelnummer: ,
Supplement: ,
Reihe
Verlag
Oxford University Press
Verlagsort
Oxford
Tag d. mündl. Prüfung
0000-00-00
Betreuer
Gutachter
Prüfer
Topic
Hochschule
Hochschulort
Fakultät
Veröffentlichungsdatum
0000-00-00
Anmeldedatum
0000-00-00
Anmelder/Inhaber
weitere Inhaber
Anmeldeland
Priorität
Begutachtungsstatus
Peer reviewed
POF Topic(s)
30501 - Systemic Analysis of Genetic and Environmental Factors that Impact Health
90000 - German Center for Diabetes Research
30202 - Environmental Health
Forschungsfeld(er)
Genetics and Epidemiology
PSP-Element(e)
G-504200-002
G-501900-401
G-504091-002
G-504100-001
G-500700-001
G-504000-002
G-503900-002
Förderungen
Copyright
Erfassungsdatum
2013-11-06