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Smith, J.G.* ; Felix, J.F.* ; Morrison, A.C.* ; Kalogeropoulos, A.* ; Trompet, S.* ; Wilk, J.B.* ; Gidlöf, O.* ; Wang, X.* ; Morley, M.* ; Mendelson, M.* ; Joehanes, R.* ; Ligthart, S.* ; Shan, X.* ; Bis, J.C.* ; Wang, Y.A.* ; Sjögren, M.* ; Ngwa, J.S.* ; Brandimarto, J.* ; Stott, D.J.* ; Aguilar, D.* ; Rice, K.M.* ; Sesso, H.D.* ; Demissie, S.* ; Buckley, B.M.* ; Taylor, K.D.* ; Ford, I.* ; Yao, C.* ; Liu, C.* ; CHARGE-SCD Consortium (Butler, J.) ; EchoGen Consortium (Vasan, R.S. ; Cappola, T.P.) ; QT-IGC Consortium (Smith, N.L. ; Gieger, C. ; Perz, S. ; Peters, A. ; Pfeufer, A. ; Waldenberger, M. ; Crotti, L.) ; CHARGE-QRS Consortium (Klopp, N. ; Müller-Nurasyid, M. ; Perz, S. ; Wichmann, H.-E. ; Meitinger, T.) ; Sotoodehnia, N.* ; van der Harst, P.* ; Stricker, B.H.* ; Kritchevsky, S.B.* ; Liu, Y.* ; Gaziano, J.M.* ; Hofman, A.* ; Moravec, C.S.* ; Uitterlinden, A.G.* ; Kellis, M.* ; van Meurs, J.B.* ; Margulies, K.B.* ; Dehghan, A.* ; Levy, D.* ; Olde, B.* ; Psaty, B.M.* ; Cupples, L.A.* ; Jukema, J.W.* ; Djousse, L.* ; Franco, O.H.* ; Boerwinkle, E.* ; Boyer, L.A.* ; Newton-Cheh, C.*

Discovery of genetic variation on chromosome 5q22 associated with mortality in heart failure.

PLoS Genet. 12:e1006034 (2016)
Verlagsversion DOI PMC
Open Access Gold
Creative Commons Lizenzvertrag
Failure of the human heart to maintain sufficient output of blood for the demands of the body, heart failure, is a common condition with high mortality even with modern therapeutic alternatives. To identify molecular determinants of mortality in patients with new-onset heart failure, we performed a meta-analysis of genome-wide association studies and follow-up genotyping in independent populations. We identified and replicated an association for a genetic variant on chromosome 5q22 with 36% increased risk of death in subjects with heart failure (rs9885413, P = 2.7x10-9). We provide evidence from reporter gene assays, computational predictions and epigenomic marks that this polymorphism increases activity of an enhancer region active in multiple human tissues. The polymorphism was further reproducibly associated with a DNA methylation signature in whole blood (P = 4.5x10-40) that also associated with allergic sensitization and expression in blood of the cytokine TSLP (P = 1.1x10-4). Knockdown of the transcription factor predicted to bind the enhancer region (NHLH1) in a human cell line (HEK293) expressing NHLH1 resulted in lower TSLP expression. In addition, we observed evidence of recent positive selection acting on the risk allele in populations of African descent. Our findings provide novel genetic leads to factors that influence mortality in patients with heart failure.
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Publikationstyp Artikel: Journalartikel
Dokumenttyp Wissenschaftlicher Artikel
Sprache
Veröffentlichungsjahr 2016
HGF-Berichtsjahr 2016
ISSN (print) / ISBN 1553-7390
e-ISSN 1553-7404
Zeitschrift PLoS Genetics
Quellenangaben Band: 12, Heft: 5, Seiten: , Artikelnummer: e1006034 Supplement: ,
Verlag Public Library of Science (PLoS)
Begutachtungsstatus Peer reviewed
POF Topic(s) 30202 - Environmental Health
30205 - Bioengineering and Digital Health
30505 - New Technologies for Biomedical Discoveries
30501 - Systemic Analysis of Genetic and Environmental Factors that Impact Health
30503 - Chronic Diseases of the Lung and Allergies
Forschungsfeld(er) Genetics and Epidemiology
Enabling and Novel Technologies
PSP-Element(e) G-504091-004
G-504091-001
G-505500-003
G-504000-001
G-503700-001
G-500700-001
G-504100-001
G-503900-001
PubMed ID 27149122
Erfassungsdatum 2016-05-25