PuSH - Publikationsserver des Helmholtz Zentrums München

Pfeiffer, S.* ; Mitter, B.* ; Oswald, A.* ; Schloter-Hai, B. ; Schloter, M. ; Declerck, S.* ; Sessitsch, A.*

Rhizosphere microbiomes of potato cultivated in the High Andes show stable and dynamic core microbiomes with different responses to plant development.

FEMS Microbiol. Ecol. 93:fiw242 (2017)
Verlagsversion DOI PMC
Open Access Gold
The rhizosphere hosts a rich microflora supporting plant nutrition and health. We examined bacterial rhizosphere microbiota of Solanum tuberosum grown in its center of origin, the Central Andean Highlands, at different vegetation stages and sites at altitudes ranging from 3245 to 4070 m.a.s.l., differing in soil characteristics, climate and the agricultural practices by 454 sequence analysis of 16S rRNA genes. We observed that the taxonomic composition of bacteria repeatedly occurring at particular stages of plant development was almost unaffected by highly diverse environmental conditions. A detailed statistical analysis on the operational taxonomic unit (OTU) level, representing bacterial species, revealed a complex community structure of the rhizosphere. We identified an opportunistic microbiome which comprises OTUs that occur randomly or under specific environmental conditions. In contrast, core microbiome members were found at all sites. The ‘stable’ component of the core microbiome consisted of few ubiquitous OTUs that were continuously abundant in all samples and vegetation stages, whereas the ‘dynamic’ component comprised OTUs that were enriched at specific vegetation stages.
Impact Factor
Scopus SNIP
Web of Science
Times Cited
Scopus
Cited By
Altmetric
3.720
1.182
45
75
Tags
Anmerkungen
Besondere Publikation
Auf Hompepage verbergern

Zusatzinfos bearbeiten
Eigene Tags bearbeiten
Privat
Eigene Anmerkung bearbeiten
Privat
Auf Publikationslisten für
Homepage nicht anzeigen
Als besondere Publikation
markieren
Publikationstyp Artikel: Journalartikel
Dokumenttyp Wissenschaftlicher Artikel
Schlagwörter rhizosphere; core microbiome; 16S rRNA; potato; Growth-promoting Rhizobacteria; Bacterial Community Structure; 16s Ribosomal-rna; Arabidopsis-thaliana; Interaction Networks; Soil Type; Diversity; Dna; Bradyrhizobium; Populations
Sprache
Veröffentlichungsjahr 2017
Prepublished im Jahr 2016
HGF-Berichtsjahr 2016
ISSN (print) / ISBN 0168-6496
e-ISSN 1574-6941
Quellenangaben Band: 93, Heft: 2, Seiten: , Artikelnummer: fiw242 Supplement: ,
Verlag Wiley
Verlagsort Oxford
Begutachtungsstatus Peer reviewed
POF Topic(s) 30202 - Environmental Health
Forschungsfeld(er) Environmental Sciences
PSP-Element(e) G-504700-001
Scopus ID 85026315621
PubMed ID 27940644
Erfassungsdatum 2016-12-31