Hertel, J.* ; Rotter, M. ; Frenzel, S.* ; Zacharias, H.U. ; Krumsiek, J. ; Rathkolb, B. ; Hrabě de Angelis, M. ; Rabstein, S.* ; Pallapies, D.* ; Brüning, T.* ; Grabe, H.J.* ; Wang-Sattler, R.
Dilution correction for dynamically influenced urinary analyte data.
Anal. Chim. Acta 1032, 18-31 (2018)
Urinary analyte data has to be corrected for the sample specific dilution as the dilution varies intra-and interpersonally dramatically, leading to non-comparable concentration measures. Most methods of dilution correction utilized nowadays like probabilistic quotient normalization or total spectra normalization result in a division of the raw data by a dilution correction factor. Here, however, we show that the implicit assumption behind the application of division, log-linearity between the urinary flow rate and the raw urinary concentration, does not hold for analytes which are not in steady state in blood. We explicate the physiological reason for this short-coming in mathematical terms and demonstrate the empirical consequences via simulations and on multiple time-point metabolomic data, showing the insufficiency of division-based normalization procedures to account for the complex non-linear analyte specific dependencies on the urinary flow rate. By reformulating normalization as a regression problem, we propose an analyte specific way to remove the dilution variance via a flexible non-linear regression methodology which then was shown to be more effective in comparison to division-based normalization procedures. In the progress, we developed several, easily applicable methods of normalization diagnostics to decide on the method of dilution correction in a given sample. On the way, we identified furthermore the time-span since last urination as an important variance factor in urinary metabolome data which is until now completely neglected. In conclusion, we present strong theoretical and empirical evidence that normalization has to be analyte specific in dynamically influenced data. Accordingly, we developed a normalization methodology for removing the dilution variance in urinary data respecting the single analyte kinetics.
Impact Factor
Scopus SNIP
Web of Science
Times Cited
Scopus
Cited By
Altmetric
Publication type
Article: Journal article
Document type
Scientific Article
Thesis type
Editors
Keywords
Normalization ; Dilution Correction ; Urine Analysis ; Metabolomics ; Model Diagnostics ; Non-linear Regression Techniques; Flow-rate; Normalization Strategies; Creatinine; Metabolomics; Adjustment; Gravity; Humans; Substances; Profiles; Patterns
Keywords plus
Language
Publication Year
2018
Prepublished in Year
HGF-reported in Year
2018
ISSN (print) / ISBN
0003-2670
e-ISSN
1873-4324
ISBN
Book Volume Title
Conference Title
Conference Date
Conference Location
Proceedings Title
Quellenangaben
Volume: 1032,
Issue: ,
Pages: 18-31
Article Number: ,
Supplement: ,
Series
Publisher
Elsevier
Publishing Place
Po Box 211, 1000 Ae Amsterdam, Netherlands
Day of Oral Examination
0000-00-00
Advisor
Referee
Examiner
Topic
University
University place
Faculty
Publication date
0000-00-00
Application date
0000-00-00
Patent owner
Further owners
Application country
Patent priority
Reviewing status
Peer reviewed
POF-Topic(s)
30202 - Environmental Health
30205 - Bioengineering and Digital Health
30201 - Metabolic Health
90000 - German Center for Diabetes Research
Research field(s)
Genetics and Epidemiology
Enabling and Novel Technologies
PSP Element(s)
G-504091-003
G-554100-001
G-500692-001
G-500600-001
G-501900-402
Grants
Copyright
Erfassungsdatum
2018-07-30